RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 FKBP6O75344 327 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 NME6O75414 186 aaPredicted RBP11.86□□□□□ -0.51
CLK3-214ENST00000564096 KCNK2O95069 426 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 SERPINA7P05543 415 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 NR0B1P51843 470 aaKnown RBP11.86□□□□□ -0.51
CLK3-214ENST00000564096 RRADP55042 308 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 RHDQ02161 417 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 CLN3Q13286 438 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 CCNIQ14094 377 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 TGIF1Q15583 401 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 FLYWCH1Q4VC44 716 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 LIN52Q52LA3 116 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 FAM98BQ52LJ0 330 aaKnown RBP11.86□□□□□ -0.51
CLK3-214ENST00000564096 EIPR1Q53HC9 387 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 JMJD6Q6NYC1 403 aaPredicted RBP11.86□□□□□ -0.51
CLK3-214ENST00000564096 FIGNL1Q6PIW4 674 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 VASH2Q86V25 355 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 BCORP1Q8N888 145 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 ZNF441Q8N8Z8 693 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 ZNF527Q8NB42 609 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 CLEC1AQ8NC01 280 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 ELP5Q8TE02 316 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 ADAMTS17Q8TE56 1095 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 THAP4Q8WY91 577 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 ADIPOR1Q96A54 375 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 COL21A1Q96P44 957 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 SDF2Q99470 211 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 MESP1Q9BRJ9 268 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 HOXD1Q9GZZ0 328 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 NXF5Q9H1B4 397 aaKnown RBP11.86□□□□□ -0.51
CLK3-214ENST00000564096 ARMC7Q9H6L4 198 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 DCAF13Q9NV06 445 aaKnown RBP11.86□□□□□ -0.51
CLK3-214ENST00000564096 ZNF223Q9UK11 482 aaPredicted RBP11.86□□□□□ -0.51
CLK3-214ENST00000564096 IFT52Q9Y366 437 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 GPC6Q9Y625 555 aaPredicted RBP11.86□□□□□ -0.51
CLK3-214ENST00000564096 KCNE3Q9Y6H6 103 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 CNOT1A5YKK6 2376 aaKnown RBP11.85□□□□□ -0.51
CLK3-214ENST00000564096 GXYLT2A0PJZ3 443 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 ENTPD5O75356 428 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 IL33O95760 270 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 DBIP07108 87 aaKnown RBP11.85□□□□□ -0.51
CLK3-214ENST00000564096 SPINK2P20155 84 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 CHRNB3Q05901 458 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 AIMP2Q13155 320 aaKnown RBP11.85□□□□□ -0.51
CLK3-214ENST00000564096 EFR3AQ14156 821 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 LARS2Q15031 903 aaKnown RBP11.85□□□□□ -0.51
CLK3-214ENST00000564096 CRTC2Q53ET0 693 aaPredicted RBP11.85□□□□□ -0.51
CLK3-214ENST00000564096 CYBRD1Q53TN4 286 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 CCNJQ5T5M9 372 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 TYW3Q6IPR3 259 aaKnown RBP11.85□□□□□ -0.51
CLK3-214ENST00000564096 AAGABQ6PD74 315 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 FRRS1Q6ZNA5 592 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 CBLL1Q75N03 491 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 EIF3MQ7L2H7 374 aaKnown RBP11.85□□□□□ -0.51
CLK3-214ENST00000564096 DND1Q8IYX4 353 aaKnown RBP11.85□□□□□ -0.51
CLK3-214ENST00000564096 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 SLC15A4Q8N697 577 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 SNIP1Q8TAD8 396 aaKnown RBP11.85□□□□□ -0.51
CLK3-214ENST00000564096 PROX1Q92786 737 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 TAMM41Q96BW9 452 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 HSH2DQ96JZ2 352 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 DPH1Q9BZG8 443 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 SLC38A1Q9H2H9 487 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 MAGIXQ9H6Y5 334 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 RUBCNLQ9H714 662 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 MTHFD2LQ9H903 347 aaPredicted RBP11.85□□□□□ -0.51
CLK3-214ENST00000564096 KLHL28Q9NXS3 571 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 MYOTQ9UBF9 498 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 TEKT2Q9UIF3 430 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 WASF3Q9UPY6 502 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 AURKCQ9UQB9 309 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 PCDHGA10Q9Y5H3 936 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 V9GYQ6 96 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 SPEGQ15772 3267 aa11.85□□□□□ -0.51
CLK3-214ENST00000564096 DMXL1Q9Y485 3027 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 TCRBV5S2A0A599 114 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 PRAMEF27A3QJZ7 478 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 M0QX08 132 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 OPN1SWP03999 348 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 THBS1P07996 1170 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 FCGR1AP12314 374 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 HPGDP15428 266 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 PRKAR1BP31321 381 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 DCTP40126 519 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 ERFP50548 548 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 CHRNEQ04844 493 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 GPR68Q15743 365 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 MAPK11Q15759 364 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 ZSWIM7Q19AV6 140 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 IFI44LQ53G44 452 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 ZNF311Q5JNZ3 666 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 DCAF10Q5QP82 559 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 FKBP9P1Q75LS8 142 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 TMEM102Q8N9M5 508 aaPredicted RBP11.84□□□□□ -0.51
CLK3-214ENST00000564096 ZSCAN1Q8NBB4 408 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 OR4N2Q8NGD1 307 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 OR52P1PQ8NH57 321 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 GEMIN6Q8WXD5 167 aaKnown RBP11.84□□□□□ -0.51
CLK3-214ENST00000564096 DIO2Q92813 273 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 TMBIM1Q969X1 311 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms