RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 SEC31AO94979 1220 aaKnown RBP9.24□□□□□ -0.93
SF3B3-204ENST00000563739 SIX3O95343 332 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-204ENST00000563739 SLU7O95391 586 aaKnown RBP9.24□□□□□ -0.93
SF3B3-204ENST00000563739 NTN1O95631 604 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 TP53P04637 393 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-204ENST00000563739 IGHV4-31P0DP07 118 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 PPP3CBP16298 524 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 EPB42P16452 691 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 PTNP21246 168 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 PTX3P26022 381 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-204ENST00000563739 GCKP35557 465 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 DSCR4P56555 118 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-204ENST00000563739 MRPS25P82663 173 aaKnown RBP9.24□□□□□ -0.93
SF3B3-204ENST00000563739 VLDLRP98155 873 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 IRF9Q00978 393 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 OCRLQ01968 901 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 TRAF3Q13114 568 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 MORF4L2Q15014 288 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 CPSF6Q16630 551 aaKnown RBP eCLIP9.24□□□□□ -0.93
SF3B3-204ENST00000563739 PRSS53Q2L4Q9 553 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 ZNF672Q499Z4 452 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-204ENST00000563739 LIPJQ5W064 366 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 MFSD12Q6NUT3 480 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 CYP20A1Q6UW02 462 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 GOLGA7Q7Z5G4 137 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 GABRG1Q8N1C3 465 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 METTL4Q8N3J2 472 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 OR52B6Q8NGF0 335 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 SMAP2Q8WU79 429 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-204ENST00000563739 FBXW5Q969U6 566 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 S100PBPQ96BU1 408 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 EFHD2Q96C19 240 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-204ENST00000563739 CDK15Q96Q40 435 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 MED11Q9P086 117 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 BCAP29Q9UHQ4 241 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 CDC42EP3Q9UKI2 254 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 RNF115Q9Y4L5 304 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 ARFGEF3Q5TH69 2177 aa9.24□□□□□ -0.93
SF3B3-204ENST00000563739 HMX2A2RU54 273 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 FAM159BA6NKW6 160 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 ELOA3DA6NLF2 546 aaPredicted RBP9.23□□□□□ -0.93
SF3B3-204ENST00000563739 SHISA9B4DS77 424 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 SUPT3HB4E1H0 165 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 H3BML4 177 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 SCO2O43819 266 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 SUPT3HO75486 399 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 ERAL1O75616 437 aaKnown RBP9.23□□□□□ -0.93
SF3B3-204ENST00000563739 REM1O75628 298 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 KLK1P06870 262 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 HK1P19367 917 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 EDNRAP25101 427 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 PSMA4P25789 261 aaKnown RBP9.23□□□□□ -0.93
SF3B3-204ENST00000563739 AGTR1P30556 359 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 SSTR1P30872 391 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 THBS2P35442 1172 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 IRX1P78414 480 aaPredicted RBP9.23□□□□□ -0.93
SF3B3-204ENST00000563739 PSG6Q00889 435 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 FAPQ12884 760 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 TAB1Q15750 504 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 ELOA3BQ3SY89 546 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 RAET1LQ5VY80 246 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 C8orf74Q6P047 294 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 APOOLQ6UXV4 268 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 COMMD6Q7Z4G1 85 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 PDIK1LQ8N165 341 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 GBP7Q8N8V2 638 aaPredicted RBP9.23□□□□□ -0.93
SF3B3-204ENST00000563739 MNS1Q8NEH6 495 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 ELOA3Q8NG57 546 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 ZNF675Q8TD23 568 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 TM4SF18Q96CE8 201 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 NXNL1Q96CM4 212 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 C1GALT1C1Q96EU7 318 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 GPR78Q96P69 363 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 ERP44Q9BS26 406 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 TRIM31Q9BZY9 425 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 OR10A4Q9H209 315 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 ESRP2Q9H6T0 727 aaKnown RBP9.23□□□□□ -0.93
SF3B3-204ENST00000563739 WDR41Q9HAD4 459 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 FOLH1BQ9HBA9 442 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 FARSBQ9NSD9 589 aaKnown RBP9.23□□□□□ -0.93
SF3B3-204ENST00000563739 NPAP1Q9NZP6 1156 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 PCDHGA11Q9Y5H2 935 aa9.23□□□□□ -0.93
SF3B3-204ENST00000563739 UGDHO60701 494 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 RAMP1O60894 148 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 PSMG1O95456 288 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 STMN1P16949 149 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 SHC1P29353 583 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 EVI2BP34910 448 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 RAB10P61026 200 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 BSPH1Q075Z2 132 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 LOXL1Q08397 574 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-204ENST00000563739 PDIA2Q13087 525 aaKnown RBP9.22□□□□□ -0.93
SF3B3-204ENST00000563739 FGFBP1Q14512 234 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 TFAP2EQ6VUC0 442 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 LARP4Q71RC2 724 aaKnown RBP eCLIP9.22□□□□□ -0.93
SF3B3-204ENST00000563739 GALNT10Q86SR1 603 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 MYLK4Q86YV6 388 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-204ENST00000563739 ZNF619Q8N2I2 560 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 OR7G2Q8NG99 324 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 OR4K17Q8NGC6 315 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms