RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 GPN2Q9H9Y4 310 aaPredicted RBP2.64□□□□□ -1.99
SHCBP1-202ENST00000563219 ELOVL3Q9HB03 270 aa2.64□□□□□ -1.99
SHCBP1-202ENST00000563219 ELL3Q9HB65 397 aaPredicted RBP2.64□□□□□ -1.99
SHCBP1-202ENST00000563219 KLRF1Q9NZS2 232 aa2.64□□□□□ -1.99
SHCBP1-202ENST00000563219 PAK5Q9P286 719 aa2.64□□□□□ -1.99
SHCBP1-202ENST00000563219 CTSZQ9UBR2 303 aa2.64□□□□□ -1.99
SHCBP1-202ENST00000563219 LCMT1Q9UIC8 334 aa2.64□□□□□ -1.99
SHCBP1-202ENST00000563219 MUTYHQ9UIF7 546 aa2.64□□□□□ -1.99
SHCBP1-202ENST00000563219 EMCNQ9ULC0 261 aa2.64□□□□□ -1.99
SHCBP1-202ENST00000563219 MRPS33Q9Y291 106 aaKnown RBP2.64□□□□□ -1.99
SHCBP1-202ENST00000563219 AUP1Q9Y679 476 aa2.64□□□□□ -1.99
SHCBP1-202ENST00000563219 AP4B1Q9Y6B7 739 aa2.64□□□□□ -1.99
SHCBP1-202ENST00000563219 IKBKGQ9Y6K9 419 aa2.64□□□□□ -1.99
SHCBP1-202ENST00000563219 CUX2O14529 1486 aa2.64□□□□□ -1.99
SHCBP1-202ENST00000563219 PCNX3Q9H6A9 2034 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 A0A0A6YYD4 124 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 C15orf38-AP3S2A0A0A6YYH1 394 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 METTL21EPA6NDL7 271 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 ARHGEF33A8MVX0 844 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 LRRTM2O43300 516 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 DUX1O43812 170 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 TBX19O60806 448 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 MFN2O95140 757 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 POP4O95707 220 aaKnown RBP2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 IL1BP01584 269 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 MT-ND1P03886 318 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 KRT8P05787 483 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 FCGR3AP08637 254 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 ALOX5P09917 674 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 CCDC159P0C7I6 412 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 FOSL2P15408 326 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 CHI3L1P36222 383 aaPredicted RBP2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 NOVA1P51513 510 aaKnown RBP2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 VCPP55072 806 aaKnown RBP2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 CBX1P83916 185 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 FKBP3Q00688 224 aaKnown RBP2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 SPIBQ01892 262 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 CD300CQ08708 224 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 GPM6BQ13491 265 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 SELPLGQ14242 412 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 RAB35Q15286 201 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 CDKN3Q16667 212 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 SNAI3Q3KNW1 292 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 KCTD21Q4G0X4 260 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 LINC01620Q4KN68 170 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 C10orf120Q5SQS8 335 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 PYHIN1Q6K0P9 492 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 PRR5LQ6MZQ0 368 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 ZNF343Q6P1L6 599 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 SCYL2Q6P3W7 929 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 HACD2Q6Y1H2 254 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 CYS1Q717R9 158 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 NET1Q7Z628 596 aaPredicted RBP2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 GTSCR1Q86UQ5 136 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 RANBP3LQ86VV4 465 aaPredicted RBP2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 CARM1Q86X55 608 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 UBQLNLQ8IYU4 475 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 SLC38A6Q8IZM9 456 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 ZNF491Q8N8L2 437 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 OR8J1Q8NGP2 316 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 OR4Q3Q8NH05 313 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 RFESDQ8TAC1 157 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 MIPOL1Q8TD10 442 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 NPRL2Q8WTW4 380 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 ADIPOR1Q96A54 375 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 AKR1E2Q96JD6 320 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 GPA33Q99795 319 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 CAPS2Q9BXY5 557 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 POLR1EQ9GZS1 481 aaKnown RBP2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 TUBB1Q9H4B7 451 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 MOB1AQ9H8S9 216 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 LPAR2Q9HBW0 351 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 RAI14Q9P0K7 980 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 PURGQ9UJV8 347 aaKnown RBP2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 KLK13Q9UKR3 277 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 OR10H1Q9Y4A9 318 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 CPQQ9Y646 472 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 SMAD5-AS1Q9Y6J3 95 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 SYNJ2O15056 1496 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 CLSPNQ9HAW4 1339 aa2.63□□□□□ -1.99
SHCBP1-202ENST00000563219 IGLV4-3A0A075B6K6 122 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 TRABD2BA6NFA1 517 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 MFSD2BA6NFX1 497 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 PPIAL4DF5H284 164 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 ZSCAN12O43309 604 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 ZNF208O43345 1280 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 BCAS1O75363 584 aaPredicted RBP2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 STX11O75558 287 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 CHRNA1P02708 482 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 IGFBP1P08833 259 aaPredicted RBP2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 WNT2P09544 360 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 IDSP22304 550 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 PTGER3P43115 390 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 SULT1E1P49888 294 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 PRELPP51888 382 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 MFAP2P55001 183 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 AIF1P55008 147 aa2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 EWSR1Q01844 656 aaKnown RBP eCLIP2.62□□□□□ -1.99
SHCBP1-202ENST00000563219 PLOD1Q02809 727 aaPredicted RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms