RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 DRD2P14416 443 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 INSL4Q14641 139 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 PUM1Q14671 1186 aaKnown RBP eCLIP13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 HFEQ30201 348 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 ATP13A5Q4VNC0 1218 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 RNASE12Q5GAN4 147 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 LY6G5CQ5SRR4 150 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 CASP12Q6UXS9 341 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 CPXM2Q8N436 756 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 NEIL3Q8TAT5 605 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 SCARB1Q8WTV0 552 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 ADAMTS14Q8WXS8 1223 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 TREX2Q9BQ50 279 aaPredicted RBP13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 DNTTIP1Q9H147 329 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 IL23AQ9NPF7 189 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 H3BN98 237 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 GNB5O14775 395 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 KIAA0355O15063 1070 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 MOSPD3O75425 235 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 RAB36O95755 333 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 PDYNP01213 254 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 RHOP08100 348 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 TYRP14679 529 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 SYN1P17600 705 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 FGF9P31371 208 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 GABRA5P31644 462 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 PTSQ03393 145 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 FGL2Q14314 439 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 RNLSQ5VYX0 342 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 TMEM215Q68D42 235 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 C22orf39Q6P5X5 142 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 IL20RBQ6UXL0 311 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 FGD2Q7Z6J4 655 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 MARCH9Q86YJ5 346 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 GPR135Q8IZ08 494 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 CHCHD4Q8N4Q1 142 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 OR1S1Q8NH92 325 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 ZDHHC1Q8WTX9 485 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 FCRL1Q96LA6 429 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 C10orf90Q96M02 699 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 OR4K3Q96R72 315 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 TMED9Q9BVK6 235 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 RNF32Q9H0A6 362 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 NPTNQ9Y639 398 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 HEPACAM2A8MVW5 462 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 PCDH7O60245 1069 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 SDC3O75056 442 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 ACRV1P26436 265 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 SNRPD1P62314 119 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 SP140Q13342 867 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 TMEM201Q5SNT2 666 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 IDNKQ5T6J7 187 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 VASNQ6EMK4 673 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 RAB11FIP2Q7L804 512 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 PDZD9Q8IXQ8 264 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 MRPL43Q8N983 215 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 APOLD1Q96LR9 279 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 EBPLQ9BY08 206 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 SUV39H2Q9H5I1 410 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 TBC1D17Q9HA65 648 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 TDP1Q9NUW8 608 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 WWOXQ9NZC7 414 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 INSL6Q9Y581 213 aa13.19□□□□□ -0.3
GTF3C1-203ENST00000562609 A0A0G2JPF8 293 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 TRABD2BA6NFA1 517 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 HNRNPCL3B7ZW38 293 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 TFP02787 698 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 RLN2P04090 185 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 C1SP09871 688 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 H2AFB1P0C5Y9 115 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 HNRNPCL4P0DMR1 293 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 CHI3L1P36222 383 aaPredicted RBP13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 TPBGQ13641 420 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 SERTAD2Q14140 314 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 HEPACAMQ14CZ8 416 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 TMEM88Q6PEY1 159 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 SHFQ7M4L6 423 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 SLC16A13Q7RTY0 426 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 GRASPQ7Z6J2 395 aaPredicted RBP13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 NAGSQ8N159 534 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 SKA2Q8WVK7 121 aaPredicted RBP13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 SCAMP4Q969E2 229 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 SEMA4CQ9C0C4 833 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 DNAJC11Q9NVH1 559 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 NKIRAS2Q9NYR9 191 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 C2orf92A0A1B0GVN3 265 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 PLSCR5A0PG75 271 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 EIF3GO75821 320 aaKnown RBP eCLIP13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 DRD5P21918 477 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 SPAM1P38567 509 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 EPHA4P54764 986 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 ANGPTL8Q6UXH0 198 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 EIF4E3Q8N5X7 224 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 CELF5Q8N6W0 485 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 C11orf65Q8NCR3 313 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 SELENOMQ8WWX9 145 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 APIPQ96GX9 242 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 WBP1LQ9NX94 342 aa13.18□□□□□ -0.3
GTF3C1-203ENST00000562609 PCDHB11Q9Y5F2 797 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms