RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 GPR171O14626 319 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 TSPAN6O43657 245 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 LANCL1O43813 399 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 MTX2O75431 263 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 TPPPO94811 219 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 SOX30O94993 753 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 APOL3O95236 402 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 IFNA16P05015 189 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 HOXD4P09016 255 aaPredicted RBP17.5■□□□□ 0.39
BBS4-204ENST00000562084 CD8BP10966 210 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 ATF4P18848 351 aaPredicted RBP17.5■□□□□ 0.39
BBS4-204ENST00000562084 ENPP1P22413 925 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 CD79BP40259 229 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 CCT3P49368 545 aaKnown RBP17.5■□□□□ 0.39
BBS4-204ENST00000562084 MLC1Q15049 377 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 MPPE1Q53F39 396 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 PRSS55Q6UWB4 352 aaPredicted RBP17.5■□□□□ 0.39
BBS4-204ENST00000562084 BTN2A1Q7KYR7 527 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 CPXM2Q8N436 756 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.5■□□□□ 0.39
BBS4-204ENST00000562084 UXS1Q8NBZ7 420 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 SRFBP1Q8NEF9 429 aaKnown RBP17.5■□□□□ 0.39
BBS4-204ENST00000562084 SETD7Q8WTS6 366 aaKnown RBP17.5■□□□□ 0.39
BBS4-204ENST00000562084 SPRYD4Q8WW59 207 aaPredicted RBP17.5■□□□□ 0.39
BBS4-204ENST00000562084 RBP7Q96R05 134 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 GPA33Q99795 319 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 PLA2G12AQ9BZM1 189 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 B3GNT4Q9C0J1 378 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 DLL4Q9NR61 685 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 ACSS1Q9NUB1 689 aaPredicted RBP17.5■□□□□ 0.39
BBS4-204ENST00000562084 CD84Q9UIB8 345 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 LSM7Q9UK45 103 aaKnown RBP17.5■□□□□ 0.39
BBS4-204ENST00000562084 HS3ST2Q9Y278 367 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 DNMT3AQ9Y6K1 912 aaPredicted RBP17.5■□□□□ 0.39
BBS4-204ENST00000562084 SESN1Q9Y6P5 492 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 TRAV6A0A075B6T7 132 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 OR2AG2A6NM03 316 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 EEF1E1O43324 174 aaKnown RBP17.5■□□□□ 0.39
BBS4-204ENST00000562084 C1orf105O95561 183 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 VIPR1P32241 457 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 STAT5AP42229 794 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 PCBP4P57723 403 aaKnown RBP17.5■□□□□ 0.39
BBS4-204ENST00000562084 MAP4K2Q12851 820 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 PLD1Q13393 1074 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 SLC22A10Q63ZE4 541 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 VASNQ6EMK4 673 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 SMARCD3Q6STE5 483 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 TOMM5Q8N4H5 51 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 RAB8BQ92930 207 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 SMG9Q9H0W8 520 aaKnown RBP17.5■□□□□ 0.39
BBS4-204ENST00000562084 EGLN3Q9H6Z9 239 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 EVA1BQ9NVM1 165 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 C2orf92A0A1B0GVN3 265 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 A0A1W2PPL8 197 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 CIB4A0PJX0 185 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 TMEM202A6NGA9 273 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 M0R3H8 397 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 MPC2O95563 127 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 EIF4EP06730 217 aaKnown RBP17.49■□□□□ 0.39
BBS4-204ENST00000562084 H2AFB2P0C5Z0 115 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 NNMTP40261 264 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 GATMP50440 423 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 GSG1Q2KHT4 349 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 SLC36A2Q495M3 483 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 NDUFAF5Q5TEU4 345 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 PRAMEF8Q5VWM4 474 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 PRAMEF7Q5VXH5 474 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 GPR135Q8IZ08 494 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 KRT78Q8N1N4 520 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 SAMD12Q8N8I0 201 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 OR56B4Q8NH76 319 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 TMEM168Q9H0V1 697 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 MTIF3Q9H2K0 278 aaKnown RBP17.49■□□□□ 0.39
BBS4-204ENST00000562084 SIRT3Q9NTG7 399 aaPredicted RBP17.49■□□□□ 0.39
BBS4-204ENST00000562084 PLXNA2O75051 1894 aa17.49■□□□□ 0.39
BBS4-204ENST00000562084 hCG_1807616A0A1W2PRN6 198 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 M0R233 179 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 SURF4O15260 269 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 PRAF2O60831 178 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 NR2F1P10589 423 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 TFPIP10646 304 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 ACP5P13686 325 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 LCN1P31025 176 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 THBS2P35442 1172 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 CAPZA2P47755 286 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 PREPP48147 710 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 MMP15P51511 669 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 TRAM2Q15035 370 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 SLC35G5Q96KT7 338 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 CASD1Q96PB1 797 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 PINK1Q9BXM7 581 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 CACNG6Q9BXT2 260 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 EPHX3Q9H6B9 360 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 SLAMF7Q9NQ25 335 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 ZFR2Q9UPR6 939 aaKnown RBP17.48■□□□□ 0.39
BBS4-204ENST00000562084 GPR52Q9Y2T5 361 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 DOCK6Q96HP0 2047 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 SYT5O00445 386 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 PRRG1O14668 218 aa17.48■□□□□ 0.39
BBS4-204ENST00000562084 MTRF1O75570 445 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms