RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 ADAM11O75078 769 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 CDH16O75309 829 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 SOD3P08294 240 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 NAGAP17050 411 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 DRD5P21918 477 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 EVI2BP34910 448 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 EIF1AXP47813 144 aaKnown RBP10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 PLTPP55058 493 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 CDH13P55290 713 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 BTKQ06187 659 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 SGCBQ16585 318 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 FAM83EQ2M2I3 478 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 OR2A2Q6IF42 318 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 LETMD1Q6P1Q0 360 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 STAC2Q6ZMT1 411 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 PAGE2Q7Z2X7 111 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 GATSQ8NAP1 163 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 C7orf57Q8NEG2 295 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 OR7G2Q8NG99 324 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 IGFBPL1Q8WX77 278 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 ZNF681Q96N22 645 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 GPR78Q96P69 363 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 REG4Q9BYZ8 158 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 PRRG4Q9BZD6 226 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 ACTR6Q9GZN1 396 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 KCNF1Q9H3M0 494 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 ELOVL6Q9H5J4 265 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 CXorf56Q9H5V9 222 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 RNF122Q9H9V4 155 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 PCTPQ9UKL6 214 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 MAGED1Q9Y5V3 778 aaPredicted RBP10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 ZNF780BQ9Y6R6 833 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.48□□□□□ -0.731e-5■■■■□ 21.5
NSMCE1-202ENST00000561960 EMC8O43402 210 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 SEMA3DO95025 777 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 PLGP00747 810 aaPredicted RBP10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 ALDOAP04075 364 aaKnown RBP10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 TP53P04637 393 aaPredicted RBP10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 PEPDP12955 493 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 TCP1P17987 556 aaKnown RBP10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 DSCR4P56555 118 aaPredicted RBP10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 GNG11P61952 73 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 CALCOCO2Q13137 446 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 BEX5Q5H9J7 111 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 TECRLQ5HYJ1 363 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 TMEM81Q6P7N7 255 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 SCIMPQ6UWF3 145 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 MILR1Q7Z6M3 343 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 KBTBD8Q8NFY9 601 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 LILRB1Q8NHL6 650 aaPredicted RBP10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 FBXO30Q8TB52 745 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 DUSP19Q8WTR2 217 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 SELENOMQ8WWX9 145 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 GTPBP3Q969Y2 492 aaKnown RBP10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 MTBPQ96DY7 904 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 VSTM2LQ96N03 204 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 BTBD9Q96Q07 612 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 ELOVL5Q9NYP7 299 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 SENP1Q9P0U3 644 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 PRODH2Q9UF12 536 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 CFL2Q9Y281 166 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 TSC22D4Q9Y3Q8 395 aa10.47□□□□□ -0.73
NSMCE1-202ENST00000561960 MALRD1Q5VYJ5 2156 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 TO15178 435 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 PHF1O43189 567 aaPredicted RBP10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 UGDHO60701 494 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 OR4F21O95013 312 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 KLHL2O95198 593 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 IGHV4-39P01824 125 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 MAGEA4P43358 317 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 HTR6P50406 440 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 RAE1P78406 368 aaKnown RBP10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 OCRLQ01968 901 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 GUSBP1Q15486 140 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 ERCC6LQ2NKX8 1250 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 ADAM5Q6NVV9 412 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 TMEM107Q6UX40 140 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 IL17RELQ6ZVW7 336 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 FAM214BQ7L5A3 538 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 GGNQ86UU5 652 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 FADS6Q8N9I5 356 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 RHEBL1Q8TAI7 183 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 UHMK1Q8TAS1 419 aaKnown RBP10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 ROBO4Q8WZ75 1007 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 S100PBPQ96BU1 408 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 ZBED6CLQ96FA7 236 aaPredicted RBP10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 OTUB1Q96FW1 271 aaPredicted RBP10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 SLC35A4Q96G79 324 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 ZNF701Q9NV72 531 aaPredicted RBP10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 AHSPQ9NZD4 102 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 XPR1Q9UBH6 696 aa10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 DMGDHQ9UI17 866 aaKnown RBP10.46□□□□□ -0.73
NSMCE1-202ENST00000561960 GNG14A0A1W2PPG7 69 aa10.45□□□□□ -0.74
NSMCE1-202ENST00000561960 ESYT3A0FGR9 886 aa10.45□□□□□ -0.74
NSMCE1-202ENST00000561960 GXYLT2A0PJZ3 443 aa10.45□□□□□ -0.74
NSMCE1-202ENST00000561960 TNFSF11O14788 317 aa10.45□□□□□ -0.74
NSMCE1-202ENST00000561960 CXCL13O43927 109 aa10.45□□□□□ -0.74
NSMCE1-202ENST00000561960 ABCB7O75027 752 aa10.45□□□□□ -0.74
NSMCE1-202ENST00000561960 SOX30O94993 753 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms