RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 OR1J4Q8NGS1 313 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 OR2T11Q8NH01 316 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 AGR3Q8TD06 166 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 DDX18Q9NVP1 670 aaKnown RBP14.54□□□□□ -0.08
LMX1B-204ENST00000561065 KLRF1Q9NZS2 232 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 RAP2CQ9Y3L5 183 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 OR10H1Q9Y4A9 318 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 ANKHD1Q8IWZ3 2542 aaKnown RBP14.54□□□□□ -0.08
LMX1B-204ENST00000561065 F8P00451 2351 aa14.54□□□□□ -0.08
LMX1B-204ENST00000561065 PCNX3Q9H6A9 2034 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 PDPK1O15530 556 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 REM1O75628 298 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 PSMG1O95456 288 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 JUNP05412 331 aaKnown RBP14.53□□□□□ -0.08
LMX1B-204ENST00000561065 SLC1A6P48664 564 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 RPL14P50914 215 aaKnown RBP14.53□□□□□ -0.08
LMX1B-204ENST00000561065 PSG6Q00889 435 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 SNTB1Q13884 538 aaKnown RBP14.53□□□□□ -0.08
LMX1B-204ENST00000561065 TOMM20Q15388 145 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 SF3B4Q15427 424 aaKnown RBP eCLIP14.53□□□□□ -0.08
LMX1B-204ENST00000561065 BEND6Q5SZJ8 279 aaPredicted RBP14.53□□□□□ -0.08
LMX1B-204ENST00000561065 ATG16L1Q676U5 607 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 TMEM107Q6UX40 140 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 GOLGA6L1Q8N7Z2 621 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 FNDC5Q8NAU1 212 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 TUBGCP3Q96CW5 907 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 WDYHV1Q96HA8 205 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 EGLN2Q96KS0 407 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 FCRL1Q96LA6 429 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 COL21A1Q96P44 957 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 ADOQ96SZ5 270 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 OR2B2Q9GZK3 357 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 TUBB1Q9H4B7 451 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 GLIPR2Q9H4G4 154 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 ACSS1Q9NUB1 689 aaPredicted RBP14.53□□□□□ -0.08
LMX1B-204ENST00000561065 ZDHHC2Q9UIJ5 367 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 FBXL2Q9UKC9 423 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 C19orf53Q9UNZ5 99 aaPredicted RBP14.53□□□□□ -0.08
LMX1B-204ENST00000561065 L3MBTL1Q9Y468 752 aa14.53□□□□□ -0.08
LMX1B-204ENST00000561065 PEX11AO75192 247 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 EPPINO95925 133 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 BCKDHAP12694 445 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 POU3F2P20265 443 aaPredicted RBP14.52□□□□□ -0.08
LMX1B-204ENST00000561065 PRPS1L1P21108 318 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 IL12BP29460 328 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 CEACAM8P31997 349 aaPredicted RBP14.52□□□□□ -0.08
LMX1B-204ENST00000561065 CLK3P49761 638 aaKnown RBP14.52□□□□□ -0.08
LMX1B-204ENST00000561065 ZNF136P52737 540 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 GAS1P54826 345 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 ZNF155Q12901 538 aaPredicted RBP14.52□□□□□ -0.08
LMX1B-204ENST00000561065 SLC25A35Q3KQZ1 300 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 CYP27C1Q4G0S4 372 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 MED12LQ86YW9 2145 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 OR6Y1Q8NGX8 325 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 RAB3IL1Q8TBN0 382 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 EFHD2Q96C19 240 aaPredicted RBP14.52□□□□□ -0.08
LMX1B-204ENST00000561065 AMDHD1Q96NU7 426 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 TSSK3Q96PN8 268 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 FLRT3Q9NZU0 649 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 CAMK2AQ9UQM7 478 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 WIF1Q9Y5W5 379 aa14.52□□□□□ -0.08
LMX1B-204ENST00000561065 AHRRA9YTQ3 701 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 TMEM233B4DJY2 109 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 FAM47E-STBD1D6RA91 191 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 SLCO1B7G3V0H7 640 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 UPK1AO00322 258 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 AKAP10O43572 662 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 DHRS4L1P0CG22 281 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 DECR1Q16698 335 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 LSM12Q3MHD2 195 aaKnown RBP14.51□□□□□ -0.09
LMX1B-204ENST00000561065 ZNF385BQ569K4 471 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 C6orf136Q5SQH8 315 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 CPTPQ5TA50 214 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 ANKRD26P1Q6NSI1 321 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 PLXDC2Q6UX71 529 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 LACC1Q8IV20 430 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 SLC44A2Q8IWA5 706 aaPredicted RBP14.51□□□□□ -0.09
LMX1B-204ENST00000561065 LRRC34Q8IZ02 419 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 ANKRD42Q8N9B4 389 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 ABTB1Q969K4 478 aaPredicted RBP14.51□□□□□ -0.09
LMX1B-204ENST00000561065 GFM2Q969S9 779 aaKnown RBP14.51□□□□□ -0.09
LMX1B-204ENST00000561065 ELP4Q96EB1 424 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 SH3GL2Q99962 352 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 G6PC3Q9BUM1 346 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 Q9N2J8 555 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 SDHAF3Q9NRP4 125 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 NOP53Q9NZM5 478 aaKnown RBP14.51□□□□□ -0.09
LMX1B-204ENST00000561065 SPG11Q96JI7 2443 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 ZNF469Q96JG9 3925 aaPredicted RBP14.51□□□□□ -0.09
LMX1B-204ENST00000561065 HIVEP1P15822 2718 aa14.51□□□□□ -0.09
LMX1B-204ENST00000561065 TMEM120BA0PK00 339 aa14.5□□□□□ -0.09
LMX1B-204ENST00000561065 SKAP2O75563 359 aaPredicted RBP14.5□□□□□ -0.09
LMX1B-204ENST00000561065 CYP4B1P13584 511 aa14.5□□□□□ -0.09
LMX1B-204ENST00000561065 SDC1P18827 310 aa14.5□□□□□ -0.09
LMX1B-204ENST00000561065 BMP5P22003 454 aa14.5□□□□□ -0.09
LMX1B-204ENST00000561065 ARRB2P32121 409 aa14.5□□□□□ -0.09
LMX1B-204ENST00000561065 TIMP3P35625 211 aa14.5□□□□□ -0.09
LMX1B-204ENST00000561065 PNLIPRP2P54317 469 aa14.5□□□□□ -0.09
LMX1B-204ENST00000561065 GFRA1P56159 465 aa14.5□□□□□ -0.09
LMX1B-204ENST00000561065 MAGOHP61326 146 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms