RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 WDR7Q9Y4E6 1490 aa4.34□□□□□ -1.71
MARK3-220ENST00000560417 EFCAB5A4FU69 1503 aa4.34□□□□□ -1.71
MARK3-220ENST00000560417 RALGAPA1Q6GYQ0 2036 aa4.34□□□□□ -1.71
MARK3-220ENST00000560417 KIF14Q15058 1648 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 TTC37Q6PGP7 1564 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 ATP10BO94823 1461 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 METP08581 1390 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 WASH3PC4AMC7 463 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 KBTBD11O94819 623 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 OR4F21O95013 312 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 NCF1P14598 390 aaPredicted RBP4.33□□□□□ -1.72
MARK3-220ENST00000560417 PVRP15151 417 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 PAICSP22234 425 aaKnown RBP4.33□□□□□ -1.72
MARK3-220ENST00000560417 GATA2P23769 480 aaPredicted RBP4.33□□□□□ -1.72
MARK3-220ENST00000560417 AXLP30530 894 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 HPDP32754 393 aaPredicted RBP4.33□□□□□ -1.72
MARK3-220ENST00000560417 TFDP1Q14186 410 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 EIF2B1Q14232 305 aaKnown RBP4.33□□□□□ -1.72
MARK3-220ENST00000560417 DCAF4L1Q3SXM0 396 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 TCTEX1D4Q5JR98 221 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 NIPAL3Q6P499 406 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 LRRC8BQ6P9F7 803 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 AFTPHQ6ULP2 937 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 WASH2PQ6VEQ5 465 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 ERASQ7Z444 233 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 MYPOPQ86VE0 399 aaPredicted RBP4.33□□□□□ -1.72
MARK3-220ENST00000560417 FAM222BQ8WU58 562 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 DNAJA3Q96EY1 480 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 DPH5Q9H2P9 285 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 GPN2Q9H9Y4 310 aaPredicted RBP4.33□□□□□ -1.72
MARK3-220ENST00000560417 LPAR2Q9HBW0 351 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 AGPAT5Q9NUQ2 364 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 DUS2Q9NX74 493 aaKnown RBP4.33□□□□□ -1.72
MARK3-220ENST00000560417 DHRS4-AS1Q9P1J3 65 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 ATP6V1HQ9UI12 483 aa4.33□□□□□ -1.72
MARK3-220ENST00000560417 GLI2P10070 1586 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 MAGI3Q5TCQ9 1506 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 TRBV7-9A0A0J9YWB2 115 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 A0A1B0GWJ7 208 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 SDHDO14521 159 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 PHF1O43189 567 aaPredicted RBP4.32□□□□□ -1.72
MARK3-220ENST00000560417 GUCA1CO95843 209 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 CHRNA1P02708 482 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 FAM200BP0CF97 657 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 THRBP10828 461 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 ZIC1Q15915 447 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 CYBRD1Q53TN4 286 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 HSP90AA5PQ58FG0 334 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 TMEM41BQ5BJD5 291 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 Q7L0L9 218 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 HIPK1Q86Z02 1210 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 SLC22A18ASQ8N1D0 253 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 TBCKQ8TEA7 893 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 C9orf85Q96MD7 179 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 FOXN4Q96NZ1 517 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 TBC1D10AQ9BXI6 508 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 PUS3Q9BZE2 481 aaKnown RBP4.32□□□□□ -1.72
MARK3-220ENST00000560417 UBXN6Q9BZV1 441 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 SLC35D1Q9NTN3 355 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 B9D1Q9UPM9 204 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 MFHAS1Q9Y4C4 1052 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 KDM6BO15054 1643 aa4.32□□□□□ -1.72
MARK3-220ENST00000560417 CCDC7Q96M83 1385 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 C11orf98E9PRG8 122 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 RAMP1O60894 148 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 ZNF253O75346 499 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 CYLC1P35663 651 aaPredicted RBP4.31□□□□□ -1.72
MARK3-220ENST00000560417 BRCC3P46736 316 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 TRPC1P48995 793 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 RPS6P62753 249 aaKnown RBP4.31□□□□□ -1.72
MARK3-220ENST00000560417 RAB35Q15286 201 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 TRIP10Q15642 601 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 ZNF311Q5JNZ3 666 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 RIPPLY2Q5TAB7 128 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 CBLN3Q6UW01 205 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 BTNL3Q6UXE8 466 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 ZNF600Q6ZNG1 722 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 ZNF573Q86YE8 665 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 EFCAB13Q8IY85 973 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.31□□□□□ -1.72
MARK3-220ENST00000560417 OR5AU1Q8NGC0 362 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 ART4Q93070 314 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 THUMPD2Q9BTF0 503 aaKnown RBP4.31□□□□□ -1.72
MARK3-220ENST00000560417 TBCDQ9BTW9 1192 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 RPP25Q9BUL9 199 aaKnown RBP4.31□□□□□ -1.72
MARK3-220ENST00000560417 COG4Q9H9E3 785 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 CALHM2Q9HA72 323 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 FAM120CQ9NX05 1096 aaKnown RBP4.31□□□□□ -1.72
MARK3-220ENST00000560417 ARMCX1Q9P291 453 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 RNF6Q9Y252 685 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 EIF3LQ9Y262 564 aaKnown RBP4.31□□□□□ -1.72
MARK3-220ENST00000560417 HECW1Q76N89 1606 aa4.31□□□□□ -1.72
MARK3-220ENST00000560417 CLIP1P30622 1438 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 CEP162Q5TB80 1403 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 GRIN2DO15399 1336 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 CFAP43Q8NDM7 1665 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 TRABD2BA6NFA1 517 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 LRRC30A6NM36 301 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 WASHC1A8K0Z3 465 aa4.3□□□□□ -1.72
MARK3-220ENST00000560417 LRRTM2O43300 516 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms