RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	TRNT1	Q96Q11	434 aa	Known RBP	11.29	□□□□□ -0.6
USP8-209	ENST00000560297	UBL7	Q96S82	380 aa	Predicted RBP	11.29	□□□□□ -0.6
USP8-209	ENST00000560297	ADO	Q96SZ5	270 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	SDF2	Q99470	211 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	ECSIT	Q9BQ95	431 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.29	□□□□□ -0.6
USP8-209	ENST00000560297	HOXD1	Q9GZZ0	328 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	ANKRD10	Q9NXR5	420 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	CALML5	Q9NZT1	146 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	LHX6	Q9UPM6	363 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	KCNE3	Q9Y6H6	103 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	PKD1L2	Q7Z442	2459 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	LAMA5	O15230	3695 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	CACNA1B	Q00975	2339 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	ANKRD33B	A6NCL7	494 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297		K7EM74	188 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	FXYD1	O00168	92 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	TNFRSF21	O75509	655 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	STX11	O75558	287 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	NEURL1	O76050	574 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	CBX6	O95503	412 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	C1QC	P02747	245 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	PDGFA	P04085	211 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297		P04436	131 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	NR2F1	P10589	423 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	ETFA	P13804	333 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	SLC6A2	P23975	617 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	FBXW4	P57775	412 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	SNTA1	Q13424	505 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	SLC25A25	Q6KCM7	469 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	TMEM81	Q6P7N7	255 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297		Q6ZS92	163 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.28	□□□□□ -0.6
USP8-209	ENST00000560297	TMEM178A	Q8NBL3	297 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	MDS2	Q8NDY4	140 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	FAM13C	Q8NE31	585 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	CATSPER1	Q8NEC5	780 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	SPPL2A	Q8TCT8	520 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	PAQR8	Q8TEZ7	354 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	OTUB1	Q96FW1	271 aa	Predicted RBP	11.28	□□□□□ -0.6
USP8-209	ENST00000560297	C5orf34	Q96MH7	638 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	SIGLEC12	Q96PQ1	595 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	GPATCH1	Q9BRR8	931 aa	Known RBP	11.28	□□□□□ -0.6
USP8-209	ENST00000560297	SPATA9	Q9BWV2	254 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	TMEM38A	Q9H6F2	299 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	KAT8	Q9H7Z6	458 aa	Known RBP	11.28	□□□□□ -0.6
USP8-209	ENST00000560297	HHATL	Q9HCP6	504 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	SH2D2A	Q9NP31	389 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	ZNF71	Q9NQZ8	489 aa	Predicted RBP	11.28	□□□□□ -0.6
USP8-209	ENST00000560297	SACM1L	Q9NTJ5	587 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	P2RX2	Q9UBL9	471 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	B3GNT3	Q9Y2A9	372 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	L3MBTL1	Q9Y468	752 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	LOC400499	M0QZD8	3231 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	MGA	Q8IWI9	3026 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	DOCK10	Q96BY6	2186 aa		11.28	□□□□□ -0.6
USP8-209	ENST00000560297	CACNA1G	O43497	2377 aa		11.27	□□□□□ -0.6
USP8-209	ENST00000560297	ZZEF1	O43149	2961 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	UGT2B11	O75310	529 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	SLC25A12	O75746	678 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	F10	P00742	488 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	IGKV1D-16	P01601	117 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	SP1	P08047	785 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	NGFR	P08138	427 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	TFPT	P0C1Z6	253 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	T-ENOL	P0DO92	83 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	CNR1	P21554	472 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	CPA2	P48052	419 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	RFX3	P48380	749 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	CLK3	P49761	638 aa	Known RBP	11.27	□□□□□ -0.61
USP8-209	ENST00000560297	ST13	P50502	369 aa	Known RBP	11.27	□□□□□ -0.61
USP8-209	ENST00000560297	MTPN	P58546	118 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	MXRA7	P84157	204 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	RBBP4	Q09028	425 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	ZNF169	Q14929	603 aa	Predicted RBP	11.27	□□□□□ -0.61
USP8-209	ENST00000560297	GPAT3	Q53EU6	434 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	ZNF766	Q5HY98	468 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	TBCEL	Q5QJ74	424 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	GCNT6	Q5T4J0	391 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	PRAMEF8	Q5VWM4	474 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	PRAMEF7	Q5VXH5	474 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	C8orf82	Q6P1X6	216 aa	Predicted RBP	11.27	□□□□□ -0.61
USP8-209	ENST00000560297	FIGNL1	Q6PIW4	674 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	C16orf89	Q6UX73	402 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	LRRC74B	Q6ZQY2	392 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	MDGA2	Q7Z553	956 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	SERPINA11	Q86U17	422 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	ZNF227	Q86WZ6	799 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	TEX19	Q8NA77	164 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	PSD4	Q8NDX1	1056 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	OR10G3	Q8NGC4	313 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	OR5M3	Q8NGP4	307 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	OR10A6	Q8NH74	314 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	OIT3	Q8WWZ8	545 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	HGD	Q93099	445 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	EFHD2	Q96C19	240 aa	Predicted RBP	11.27	□□□□□ -0.61
USP8-209	ENST00000560297	SLC39A3	Q9BRY0	314 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	ZNF350	Q9GZX5	532 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	SAP130	Q9H0E3	1048 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	IKZF5	Q9H5V7	419 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms