RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 Q9N2J8 555 aa13.43□□□□□ -0.26
ZEB1-218ENST00000560196 PNO1Q9NRX1 252 aaKnown RBP13.43□□□□□ -0.26
ZEB1-218ENST00000560196 RXFP3Q9NSD7 469 aa13.43□□□□□ -0.26
ZEB1-218ENST00000560196 CTSFQ9UBX1 484 aa13.43□□□□□ -0.26
ZEB1-218ENST00000560196 SLC13A4Q9UKG4 626 aa13.43□□□□□ -0.26
ZEB1-218ENST00000560196 MKLN1Q9UL63 735 aa13.43□□□□□ -0.26
ZEB1-218ENST00000560196 A4GNTQ9UNA3 340 aa13.43□□□□□ -0.26
ZEB1-218ENST00000560196 CHST2Q9Y4C5 530 aa13.43□□□□□ -0.26
ZEB1-218ENST00000560196 PCDHGA10Q9Y5H3 936 aa13.43□□□□□ -0.26
ZEB1-218ENST00000560196 A0A1W2PRQ8 180 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 E9PQ18 207 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 TMX2-CTNND1H3BSU7 103 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 M0R3H8 397 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 TNFRSF10AO00220 468 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 POLR1CO15160 346 aaPredicted RBP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 SLC16A6O15403 523 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 LRP3O75074 770 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 SEMA7AO75326 666 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 OXSR1O95747 527 aaPredicted RBP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 H1F0P07305 194 aaKnown RBP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 ZGLP1P0C6A0 271 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 CT45A8P0DMV1 189 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 CT45A9P0DMV2 189 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 NID1P14543 1247 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 PIGAP37287 484 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 PPICP45877 212 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 YAP1P46937 504 aaKnown RBP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 EFNA3P52797 238 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 PSMD4P55036 377 aaKnown RBP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 SLC37A1P57057 533 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 DCAF7P61962 342 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 EEF1A1P68104 462 aaKnown RBP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 DGCR6Q14129 220 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 SF3A2Q15428 464 aaKnown RBP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 NSDHLQ15738 373 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 EXOC3L2Q2M3D2 409 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 CT45A2Q5DJT8 189 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 CCNJQ5T5M9 372 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 NPSR1Q6W5P4 371 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 LACC1Q8IV20 430 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 LINC00471Q8N535 108 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 MORN4Q8NDC4 146 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 OR10G2Q8NGC3 310 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 OR6T1Q8NGN1 323 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 VANGL1Q8TAA9 524 aaPredicted RBP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 ZNF721Q8TF20 911 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 RMND5BQ96G75 393 aaPredicted RBP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 PRRC1Q96M27 445 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 FUZQ9BT04 418 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 G6PC3Q9BUM1 346 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 POLR2J2Q9GZM3 115 aaKnown RBP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 QRSL1Q9H0R6 528 aaKnown RBP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 POLR2J3Q9H1A7 115 aaKnown RBP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 ZNF696Q9H7X3 374 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 NMNAT1Q9HAN9 279 aaPredicted RBP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 APMAPQ9HDC9 416 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 TMEM9BQ9NQ34 198 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 BATF3Q9NR55 127 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 PNPLA3Q9NST1 481 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 FAM118AQ9NWS6 357 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 MKL2Q9ULH7 1088 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 GPR55Q9Y2T6 319 aaPredicted RBP13.42□□□□□ -0.26
ZEB1-218ENST00000560196 CLCA3PQ9Y6N3 262 aa13.42□□□□□ -0.26
ZEB1-218ENST00000560196 OR6C76A6NM76 312 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 FAAHO00519 579 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 UGT2B11O75310 529 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 CCNB2O95067 398 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 TNFAIP8O95379 198 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 UBTFL6P0CB48 400 aaPredicted RBP13.41□□□□□ -0.26
ZEB1-218ENST00000560196 IL7RP16871 459 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 LCN1P31025 176 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 KCNAB2Q13303 367 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 IL18R1Q13478 541 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 GPR68Q15743 365 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 NPTX1Q15818 432 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 ZNF141Q15928 474 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 ANKRD34AQ69YU3 496 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 KRT80Q6KB66 452 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 DEF8Q6ZN54 512 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 ZNF836Q6ZNA1 936 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 RBM45Q8IUH3 476 aaKnown RBP13.41□□□□□ -0.26
ZEB1-218ENST00000560196 OFCC1Q8IZS5 231 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 ATG16L2Q8NAA4 619 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 ZSCAN1Q8NBB4 408 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 ZNF555Q8NEP9 628 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 SLC2A12Q8TD20 617 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 ATOH1Q92858 354 aaPredicted RBP13.41□□□□□ -0.26
ZEB1-218ENST00000560196 SLC35B4Q969S0 331 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 ALPK1Q96QP1 1244 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 PRRX2Q99811 253 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 WFDC6Q9BQY6 131 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 EDEM2Q9BV94 578 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 ITPAQ9BY32 194 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 YTHDF1Q9BYJ9 559 aaKnown RBP13.41□□□□□ -0.26
ZEB1-218ENST00000560196 ANKRD19PQ9H560 264 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 ARMC7Q9H6L4 198 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 AKAP7Q9P0M2 348 aaPredicted RBP13.41□□□□□ -0.26
ZEB1-218ENST00000560196 KIF17Q9P2E2 1029 aa13.41□□□□□ -0.26
ZEB1-218ENST00000560196 SCOCQ9UIL1 159 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms