RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 OR4N2Q8NGD1 307 aa17.69■□□□□ 0.42
RABGGTA-214ENST00000560163 KCTD4Q8WVF5 259 aa17.69■□□□□ 0.42
RABGGTA-214ENST00000560163 KLHL29Q96CT2 875 aa17.69■□□□□ 0.42
RABGGTA-214ENST00000560163 ERP27Q96DN0 273 aa17.69■□□□□ 0.42
RABGGTA-214ENST00000560163 TRIM31Q9BZY9 425 aa17.69■□□□□ 0.42
RABGGTA-214ENST00000560163 NOL11Q9H8H0 719 aaKnown RBP17.69■□□□□ 0.42
RABGGTA-214ENST00000560163 ZBTB26Q9HCK0 441 aa17.69■□□□□ 0.42
RABGGTA-214ENST00000560163 MED11Q9P086 117 aa17.69■□□□□ 0.42
RABGGTA-214ENST00000560163 PPP4R1LQ9P1A2 415 aa17.69■□□□□ 0.42
RABGGTA-214ENST00000560163 PSME2Q9UL46 239 aa17.69■□□□□ 0.42
RABGGTA-214ENST00000560163 LIPT1Q9Y234 373 aa17.69■□□□□ 0.42
RABGGTA-214ENST00000560163 H3BML4 177 aa17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 ADAM11O75078 769 aa17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 SS18L1O75177 396 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 BCAS2O75934 225 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 FCGR2AP12318 317 aa17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 GFAPP14136 432 aa17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 PSMB1P20618 241 aaKnown RBP17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 IL12BP29460 328 aa17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 EVI2BP34910 448 aa17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 TMEM44Q2T9K0 475 aa17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 GLYR1Q49A26 553 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 C3orf62Q6ZUJ4 267 aa17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 SMAP2Q8WU79 429 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 FBXW5Q969U6 566 aa17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 EFHD2Q96C19 240 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 GMPPAQ96IJ6 420 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 NTMT1Q9BV86 223 aa17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 GPR52Q9Y2T5 361 aa17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 EMC9Q9Y3B6 208 aa17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 TNPO3Q9Y5L0 923 aaKnown RBP17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 MAGED1Q9Y5V3 778 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 AP4B1Q9Y6B7 739 aa17.68■□□□□ 0.42
RABGGTA-214ENST00000560163 A0A096LNT2 108 aa17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 GPRIN2O60269 458 aa17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 NDUFS7O75251 213 aa17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 ALDOAP04075 364 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 RPS3AP61247 264 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 IRF9Q00978 393 aa17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 CTU2Q2VPK5 515 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 NCMAPQ5T1S8 102 aa17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 BEND4Q6ZU67 534 aa17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 CCDC116Q8IYX3 515 aa17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 GFM2Q969S9 779 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 C1GALT1C1Q96EU7 318 aa17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 GPR78Q96P69 363 aa17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 STMN4Q9H169 189 aaPredicted RBP17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 FOLH1BQ9HBA9 442 aa17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 CLEC4AQ9UMR7 237 aa17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 ZNF780BQ9Y6R6 833 aa17.67■□□□□ 0.42
RABGGTA-214ENST00000560163 SCO2O43819 266 aa17.66■□□□□ 0.42
RABGGTA-214ENST00000560163 KRT20P35900 424 aa17.66■□□□□ 0.42
RABGGTA-214ENST00000560163 ACAP2Q15057 778 aa17.66■□□□□ 0.42
RABGGTA-214ENST00000560163 SGCBQ16585 318 aa17.66■□□□□ 0.42
RABGGTA-214ENST00000560163 PGGHGQ32M88 737 aa17.66■□□□□ 0.42
RABGGTA-214ENST00000560163 C6orf52Q5T4I8 152 aa17.66■□□□□ 0.42
RABGGTA-214ENST00000560163 UHMK1Q8TAS1 419 aaKnown RBP17.66■□□□□ 0.42
RABGGTA-214ENST00000560163 KAT2AQ92830 837 aa17.66■□□□□ 0.42
RABGGTA-214ENST00000560163 NEUROG1Q92886 237 aa17.66■□□□□ 0.42
RABGGTA-214ENST00000560163 C11orf24Q96F05 449 aaPredicted RBP17.66■□□□□ 0.42
RABGGTA-214ENST00000560163 CDC42EP3Q9UKI2 254 aa17.66■□□□□ 0.42
RABGGTA-214ENST00000560163 SNX24Q9Y343 169 aa17.66■□□□□ 0.42
RABGGTA-214ENST00000560163 RNF115Q9Y4L5 304 aa17.66■□□□□ 0.42
RABGGTA-214ENST00000560163 YLPM1P49750 1951 aaKnown RBP17.66■□□□□ 0.42
RABGGTA-214ENST00000560163 CD8AP01732 235 aa17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 TRA2BP62995 288 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 MRPS22P82650 360 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 PSG6Q00889 435 aa17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 TRAF3Q13114 568 aa17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 FAM83EQ2M2I3 478 aa17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 SLC44A2Q8IWA5 706 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 CTAGE3PQ8IX95 158 aa17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 DUSP19Q8WTR2 217 aa17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 GTPBP3Q969Y2 492 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 PTGES2Q9H7Z7 377 aa17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 FANCFQ9NPI8 374 aa17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 SDHAF3Q9NRP4 125 aa17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 FARSBQ9NSD9 589 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 FLRT3Q9NZU0 649 aa17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 GDF2Q9UK05 429 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 UTS2RQ9UKP6 389 aa17.65■□□□□ 0.42
RABGGTA-214ENST00000560163 EIF3HO15372 352 aaKnown RBP eCLIP17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 C2P06681 752 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 GSTA2P09210 222 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 THBS2P35442 1172 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 CCNG1P51959 295 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 CTBP2P56545 445 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 ZNF672Q499Z4 452 aaPredicted RBP17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 CCDC91Q7Z6B0 441 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 CREG2Q8IUH2 290 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 PPM1NQ8N819 430 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 OR9A2Q8NGT5 310 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 ATP6V1E2Q96A05 226 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 S100PBPQ96BU1 408 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 ADGRG7Q96K78 797 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 GRIP2Q9C0E4 1043 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 LRTM1Q9HBL6 345 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 TMEM160Q9NX00 188 aa17.64■□□□□ 0.41
RABGGTA-214ENST00000560163 ABCG2Q9UNQ0 655 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms