RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 ARMC7Q9H6L4 198 aa13.52□□□□□ -0.25
RABGGTA-212ENST00000559974 HRASLS2Q9NWW9 162 aa13.52□□□□□ -0.25
RABGGTA-212ENST00000559974 TVP23BQ9NYZ1 205 aa13.52□□□□□ -0.25
RABGGTA-212ENST00000559974 PCDHGA3Q9Y5H0 932 aa13.52□□□□□ -0.25
RABGGTA-212ENST00000559974 SPEGQ15772 3267 aa13.52□□□□□ -0.25
RABGGTA-212ENST00000559974 LOC100506127A0A0U1RQW1 187 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 CPSF4LA6NMK7 179 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 PRKYO43930 277 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 SULT1C4O75897 302 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 CELA2BP08218 269 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 CCNYL3P0C7X3 344 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 DBTP11182 482 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 BMP4P12644 408 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 AVPR2P30518 371 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 IFNA8P32881 189 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 CSTF2P33240 577 aaKnown RBP eCLIP13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 AVPR1BP47901 424 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 GIPRP48546 466 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 CDK5Q00535 292 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 ZNF91Q05481 1191 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 ST3GAL3Q11203 375 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 EIF2B5Q13144 721 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 NCF4Q15080 339 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 ARHGAP11BQ3KRB8 267 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 ZNF628Q5EBL2 1059 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 SLC25A30Q5SVS4 291 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 DCDC5Q6ZRR9 648 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 BTLAQ7Z6A9 289 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 SFTPA2Q8IWL1 248 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 FAM26EQ8N5C1 309 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 SIMC1Q8NDZ2 872 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 KBTBD8Q8NFY9 601 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 MCFD2Q8NI22 146 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 GNPDA2Q8TDQ7 276 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 CHPT1Q8WUD6 406 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 TMEM80Q96HE8 168 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 COX4I2Q96KJ9 171 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 OR51E2Q9H255 320 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 SEMA4GQ9NTN9 838 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 MKLN1Q9UL63 735 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 ZNF443Q9Y2A4 671 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 SPACA6W5XKT8 324 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 TLX2O43763 284 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 SOX18P35713 384 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 SMSP52788 366 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 LIMK1P53667 647 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 RGS8P57771 180 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 RHAGQ02094 409 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 INAQ16352 499 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 DUSP5Q16690 384 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 ZNF542PQ5EBM4 170 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 MANEAQ5SRI9 462 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 TYW3Q6IPR3 259 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 C19orf48Q6RUI8 117 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 PRSS41Q7RTY9 318 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 KIF18BQ86Y91 864 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 CENPSQ8N2Z9 138 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 CLIP4Q8N3C7 705 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 DACH2Q96NX9 599 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 TSSK6Q9BXA6 273 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 MTHFD2LQ9H903 347 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 CACYBPQ9HB71 228 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 WSB2Q9NYS7 404 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 C19orf53Q9UNZ5 99 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 WDR45Q9Y484 360 aa13.51□□□□□ -0.25
RABGGTA-212ENST00000559974 KNL1Q8NG31 2342 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 SPTY2D1-AS1A0A0U1RR47 76 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 METTL15A6NJ78 407 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 CCRL2O00421 344 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 AP3D1O14617 1153 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 LAMTOR5O43504 91 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 CBFA2T3O75081 653 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 THEGLP0DJG4 465 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 ACP2P11117 423 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 TRHRP34981 398 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 ID2Q02363 134 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 COL9A2Q14055 689 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 TSTQ16762 297 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 TIMM50Q3ZCQ8 353 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 ZNF404Q494X3 552 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 FHL5Q5TD97 284 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 ACSM5Q6NUN0 579 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 THADAQ6YHU6 1953 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 ZNF730Q6ZMV8 503 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 BCDIN3DQ7Z5W3 292 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 BMP8AQ7Z5Y6 402 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 TAF8Q7Z7C8 310 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 PEX5LQ8IYB4 626 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 TMEFF1Q8IYR6 380 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 TEX47Q8TBZ9 253 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 CHCHD6Q9BRQ6 235 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 PLA2G12AQ9BZM1 189 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 MMP27Q9H306 513 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 GPR27Q9NS67 375 aa13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 LSM2Q9Y333 95 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-212ENST00000559974 TMEM131Q92545 1883 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 FGF17O60258 216 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 LDB3O75112 727 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 ATP1B1P05026 303 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 OCM2P0CE71 109 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms