RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 CACYBPQ9HB71 228 aaKnown RBP16.6■□□□□ 0.25
SNX1-208ENST00000559844 ANKHQ9HCJ1 492 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 A4GNTQ9UNA3 340 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 ADAMTS20P59510 1910 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 A0A087WV62 115 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 IGHV5-10-1A0A0J9YXX1 117 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 A0A1W2PRQ8 180 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 SLC9B1P1A6NJY1 282 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 M0R3H8 397 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 CYR61O00622 381 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 SRPX2O60687 465 aaPredicted RBP16.59■□□□□ 0.25
SNX1-208ENST00000559844 WBP4O75554 376 aaKnown RBP16.59■□□□□ 0.25
SNX1-208ENST00000559844 GPR75O95800 540 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 ATP1B1P05026 303 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 PCMT1P22061 227 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 PCSK6P29122 969 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 KRT20P35900 424 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 UGT2B15P54855 530 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 CLDN6P56747 220 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 CDC42P60953 191 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 SKP1P63208 163 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 PIGFQ07326 219 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 DGCR6Q14129 220 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 ZNF311Q5JNZ3 666 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 PHF19Q5T6S3 580 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 PRSS41Q7RTY9 318 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 RBM45Q8IUH3 476 aaKnown RBP16.59■□□□□ 0.25
SNX1-208ENST00000559844 MCATQ8IVS2 390 aaKnown RBP16.59■□□□□ 0.25
SNX1-208ENST00000559844 APH1BQ8WW43 257 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 SLC35A4Q96G79 324 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 CCDC74BQ96LY2 380 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 PRRC1Q96M27 445 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 UCK2Q9BZX2 261 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 ANKRA2Q9H9E1 313 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 PLCXD1Q9NUJ7 323 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 ERVK-18Q9QC07 812 aa16.59■□□□□ 0.25
SNX1-208ENST00000559844 C19orf53Q9UNZ5 99 aaPredicted RBP16.59■□□□□ 0.25
SNX1-208ENST00000559844 IGHV5-51A0A0C4DH38 117 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 DCDC2BA2VCK2 349 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 ZNF99A8MXY4 864 aaPredicted RBP16.58■□□□□ 0.25
SNX1-208ENST00000559844 H3BMQ9 156 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 OR10H3O60404 316 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 MPZL2O60487 215 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 SEMA7AO75326 666 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 CDK4P11802 303 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 POU2F1P14859 743 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 SEPHS1P49903 392 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 CRISP1P54107 249 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 SHC2P98077 582 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 DHRS4L2Q6PKH6 230 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 KLHL17Q6TDP4 642 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 Q6ZPB1 254 aaPredicted RBP16.58■□□□□ 0.25
SNX1-208ENST00000559844 SLITRK4Q8IW52 837 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 RCBTB1Q8NDN9 531 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 RHOXF1Q8NHV9 184 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 TCTN2Q96GX1 697 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 COG8Q96MW5 612 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 ARHGDIGQ99819 225 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 FAM60AQ9NP50 221 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 AASSQ9UDR5 926 aa16.58■□□□□ 0.25
SNX1-208ENST00000559844 KNTC1P50748 2209 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 DKK1O94907 266 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 OSMP13725 252 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 PRKAR1BP31321 381 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 IDH2P48735 452 aaKnown RBP16.58■□□□□ 0.24
SNX1-208ENST00000559844 PDX1P52945 283 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 EMX1Q04741 257 aaPredicted RBP16.58■□□□□ 0.24
SNX1-208ENST00000559844 CHRNEQ04844 493 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 NDUFA9Q16795 377 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 ZCCHC12Q6PEW1 402 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 OLIG3Q7RTU3 272 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 PRSS48Q7RTY5 328 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 PRSS42Q7Z5A4 293 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 RAB2BQ8WUD1 216 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 FUZQ9BT04 418 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 DGCR6LQ9BY27 220 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 SOHLH2Q9NX45 425 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 IMPAD1Q9NX62 359 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 KLHL28Q9NXS3 571 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 CLCA2Q9UQC9 943 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 IFT52Q9Y366 437 aa16.58■□□□□ 0.24
SNX1-208ENST00000559844 SH3PXD2BA1X283 911 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 ZAR1LA6NP61 321 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 AGRPO00253 132 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 TOX3O15405 576 aaPredicted RBP16.57■□□□□ 0.24
SNX1-208ENST00000559844 FGF17O60258 216 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 ZBTB11O95625 1053 aaPredicted RBP16.57■□□□□ 0.24
SNX1-208ENST00000559844 EPPINO95925 133 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 FUT4P22083 530 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 PTGES3Q15185 160 aaKnown RBP16.57■□□□□ 0.24
SNX1-208ENST00000559844 ARHGAP11BQ3KRB8 267 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 FHL5Q5TD97 284 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 HES3Q5TGS1 186 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 COMTD1Q86VU5 262 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 CARFQ8N187 725 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 DNAJC22Q8N4W6 341 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 OR6T1Q8NGN1 323 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 ZNF675Q8TD23 568 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 SLC9A6Q92581 669 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 RORBQ92753 470 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms