RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 HEY2Q9UBP5 337 aa8.28□□□□□ -1.08
HDDC3-204ENST00000559834 PROCRQ9UNN8 238 aa8.28□□□□□ -1.08
HDDC3-204ENST00000559834 ABCG2Q9UNQ0 655 aa8.28□□□□□ -1.08
HDDC3-204ENST00000559834 ZNF337Q9Y3M9 751 aa8.28□□□□□ -1.08
HDDC3-204ENST00000559834 ZNF175Q9Y473 711 aa8.28□□□□□ -1.08
HDDC3-204ENST00000559834 ESYT3A0FGR9 886 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 A8MT66 165 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 SMAD7O15105 426 aaKnown RBP8.27□□□□□ -1.09
HDDC3-204ENST00000559834 SCO2O43819 266 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 PCDH7O60245 1069 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 SLITRK5O94991 958 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 CGAP01215 116 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 IL3P08700 152 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 FCGR2AP12318 317 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 PPP3CBP16298 524 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 TSPAN8P19075 237 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 HMOX2P30519 316 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 EVI2BP34910 448 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 GAS1P54826 345 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 PSMD4P55036 377 aaKnown RBP8.27□□□□□ -1.09
HDDC3-204ENST00000559834 B3GALT5-AS1P59052 145 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 SIRPAP78324 504 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 CKAP4Q07065 602 aaKnown RBP8.27□□□□□ -1.09
HDDC3-204ENST00000559834 ZNHIT3Q15649 155 aaPredicted RBP8.27□□□□□ -1.09
HDDC3-204ENST00000559834 DECR1Q16698 335 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 SH2D4BQ5SQS7 431 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 C8orf74Q6P047 294 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 GPRIN3Q6ZVF9 776 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 PLEKHM3Q6ZWE6 761 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 RPS27LQ71UM5 84 aaKnown RBP8.27□□□□□ -1.09
HDDC3-204ENST00000559834 FADS6Q8N9I5 356 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 ZNF610Q8N9Z0 462 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 OR2M3Q8NG83 312 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 C16orf78Q8WTQ4 265 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 RNF138Q8WVD3 245 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 FIG4Q92562 907 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 CAVIN3Q969G5 261 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 PERPQ96FX8 193 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 ZC3HAV1LQ96H79 300 aaKnown RBP8.27□□□□□ -1.09
HDDC3-204ENST00000559834 HBEGFQ99075 208 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 PAFAH2Q99487 392 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 PRRG4Q9BZD6 226 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 OPN3Q9H1Y3 402 aaPredicted RBP8.27□□□□□ -1.09
HDDC3-204ENST00000559834 ANKRA2Q9H9E1 313 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 RNF122Q9H9V4 155 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 Q9N2J8 555 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 ZDHHC18Q9NUE0 388 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 MED11Q9P086 117 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 ZNF180Q9UJW8 692 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 ZNF225Q9UK10 706 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 PYCARDQ9ULZ3 195 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 STK38LQ9Y2H1 464 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 AP4B1Q9Y6B7 739 aa8.27□□□□□ -1.09
HDDC3-204ENST00000559834 NIPBLQ6KC79 2804 aaeCLIP8.26□□□□□ -1.09
HDDC3-204ENST00000559834 EXPH5Q8NEV8 1989 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
HDDC3-204ENST00000559834 A0A087WV62 115 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 TTC36A6NLP5 189 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 TRIM49D1C9J1S8 452 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 POC1B-GALNT4F8VUJ3 575 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 H3BML4 177 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 SEC14L5O43304 696 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 FADS1O60427 444 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 TMCC2O75069 709 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 PLGP00747 810 aaPredicted RBP8.26□□□□□ -1.09
HDDC3-204ENST00000559834 SNRPAP09012 282 aaKnown RBP8.26□□□□□ -1.09
HDDC3-204ENST00000559834 ANXA4P09525 319 aaPredicted RBP8.26□□□□□ -1.09
HDDC3-204ENST00000559834 CHN1P15882 459 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 IMPDH1P20839 514 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 PCSK6P29122 969 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 SUCLG1P53597 346 aaKnown RBP8.26□□□□□ -1.09
HDDC3-204ENST00000559834 CLDN15P56746 228 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 ETF1P62495 437 aaKnown RBP8.26□□□□□ -1.09
HDDC3-204ENST00000559834 PSG6Q00889 435 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 C17orf67Q0P5P2 114 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 ZNF155Q12901 538 aaPredicted RBP8.26□□□□□ -1.09
HDDC3-204ENST00000559834 PON3Q15166 354 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 BEX5Q5H9J7 111 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 GALNT18Q6P9A2 607 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 NPSR1Q6W5P4 371 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 FAM214BQ7L5A3 538 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 ZNF572Q7Z3I7 529 aaPredicted RBP8.26□□□□□ -1.09
HDDC3-204ENST00000559834 LCA5Q86VQ0 697 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 SLC22A9Q8IVM8 553 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 CIARTQ8N365 385 aaPredicted RBP8.26□□□□□ -1.09
HDDC3-204ENST00000559834 TMEM151AQ8N4L1 468 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 OR7G2Q8NG99 324 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 OR4N2Q8NGD1 307 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 FNDC9Q8TBE3 224 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 DUSP19Q8WTR2 217 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 ZNF382Q96SR6 550 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 ACPTQ9BZG2 426 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 GSX2Q9BZM3 304 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 KLHL4Q9C0H6 718 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 CXorf56Q9H5V9 222 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 C3orf14Q9HBI5 128 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 PLSCR4Q9NRQ2 329 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 FAM120CQ9NX05 1096 aaKnown RBP8.26□□□□□ -1.09
HDDC3-204ENST00000559834 PAQR5Q9NXK6 330 aaPredicted RBP8.26□□□□□ -1.09
HDDC3-204ENST00000559834 DMGDHQ9UI17 866 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms