RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 NECAB1Q8N987 351 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 FAM133AQ8N9E0 248 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 Q8N9G6 341 aaPredicted RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ZSCAN4Q8NAM6 433 aaPredicted RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 AQP11Q8NBQ7 271 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 OR56B2PQ8NGI1 322 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 OR8J1Q8NGP2 316 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 CNIH3Q8TBE1 160 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 HCAR2Q8TDS4 363 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 TBCKQ8TEA7 893 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 MAIP1Q8WWC4 291 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 DLX4Q92988 240 aaPredicted RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 C18orf25Q96B23 403 aaPredicted RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF501Q96CX3 271 aaPredicted RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 TPD52L3Q96J77 140 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 TCEANC2Q96MN5 208 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 TESK2Q96S53 571 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 CCNL2Q96S94 520 aaPredicted RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 LGMNQ99538 433 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 OMDQ99983 421 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 FAM173AQ9BQD7 235 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 SLC39A3Q9BRY0 314 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 TTYH2Q9BSA4 534 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 TMEM43Q9BTV4 400 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 RPP25Q9BUL9 199 aaKnown RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 COMMD4Q9H0A8 199 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 SLC25A51Q9H1U9 297 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 VPS33BQ9H267 617 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 GPN2Q9H9Y4 310 aaPredicted RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 SDF2L1Q9HCN8 221 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 FGF22Q9HCT0 170 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 APMAPQ9HDC9 416 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 RAB18Q9NP72 206 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 HYPKQ9NX55 129 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 NDE1Q9NXR1 346 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 THYN1Q9P016 225 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 SEC14L3Q9UDX4 400 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 CRLS1Q9UJA2 301 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 CDH9Q9ULB4 789 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 RPH3ALQ9UNE2 315 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 PROCRQ9UNN8 238 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 EXOGQ9Y2C4 368 aaKnown RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 GSTK1Q9Y2Q3 226 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 PYGO1Q9Y3Y4 419 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 RNF115Q9Y4L5 304 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 CPQQ9Y646 472 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 SLCO1B1Q9Y6L6 691 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 IGLV7-46A0A075B6I9 117 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 IGHV3-20A0A0C4DH32 117 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 ARHGEF35A5YM69 484 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 HELTA6NFD8 242 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 G3V2L1 256 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 POLR2DO15514 142 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 GPRIN2O60269 458 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 LCMT2O60294 686 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 SNNO75324 88 aaPredicted RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 WBP4O75554 376 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 SORBS2O94875 1100 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 NXPH4O95158 308 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 POP4O95707 220 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 PNMTP11086 282 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 FOSL2P15408 326 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 PCMT1P22061 227 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 ATP5A1P25705 553 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 HPCAL1P37235 193 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 CAPGP40121 348 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 SLC1A4P43007 532 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 SSR1P43307 286 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 STK19P49842 368 aaPredicted RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 MFAP2P55001 183 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 TMEM50BP56557 158 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 FKBP3Q00688 224 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 BEX3Q00994 111 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 EWSR1Q01844 656 aaKnown RBP eCLIP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 MAP2K1Q02750 393 aaPredicted RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 PLOD1Q02809 727 aaPredicted RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 ITPK1Q13572 414 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 MESDQ14696 234 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 ATXN7L3Q14CW9 347 aaPredicted RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 FASTKD3Q14CZ7 662 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 RCN1Q15293 331 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 SYPL1Q16563 259 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 GGTA1PQ4G0N0 100 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 CELF3Q5SZQ8 465 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 SEL1L2Q5TEA6 688 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 TAF3Q5VWG9 929 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 REP15Q6BDI9 236 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 PYHIN1Q6K0P9 492 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 ACSM5Q6NUN0 579 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 ATRAIDQ6UW56 229 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 ADAMTSL5Q6ZMM2 481 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 UTS2BQ765I0 119 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 PRSS48Q7RTY5 328 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 APTXQ7Z2E3 356 aaKnown RBP1.93□□□□□ -2.1
GABPB1-209ENST00000559100 CEACAM19Q7Z692 300 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 LRRTM1Q86UE6 522 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 ERICH1Q86X53 443 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 ZFAND4Q86XD8 727 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 RNF130Q86XS8 419 aa1.93□□□□□ -2.1
GABPB1-209ENST00000559100 CCDC71Q8IV32 467 aaPredicted RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms