RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 SPDYE7PQ495Y7 208 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 ARSJQ5FYB0 599 aaPredicted RBP10.96□□□□□ -0.65
TPM1-216ENST00000558910 C6orf136Q5SQH8 315 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 FNDC7Q5VTL7 733 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 PLXDC2Q6UX71 529 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 EID3Q8N140 333 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 C17orf47Q8NEP4 570 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 NUP43Q8NFH3 380 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 OR14L1PQ8NHC6 308 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 NEIL3Q8TAT5 605 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 RND1Q92730 232 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 SARAFQ96BY9 339 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 RMND5BQ96G75 393 aaPredicted RBP10.96□□□□□ -0.65
TPM1-216ENST00000558910 C16orf58Q96GQ5 468 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 BTBD9Q96Q07 612 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 DMRTA2Q96SC8 542 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 NUF2Q9BZD4 464 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 DKKL1Q9UK85 242 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 CBLCQ9ULV8 474 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 C19orf53Q9UNZ5 99 aaPredicted RBP10.96□□□□□ -0.65
TPM1-216ENST00000558910 RNF6Q9Y252 685 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 C15orf41Q9Y2V0 281 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 CACNA1DQ01668 2161 aa10.96□□□□□ -0.66
TPM1-216ENST00000558910 MED12Q93074 2177 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 TMEM120BA0PK00 339 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 AQP7O14520 342 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 BCKDKO14874 412 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 SCAMP2O15127 329 aaKnown RBP10.95□□□□□ -0.66
TPM1-216ENST00000558910 TM9SF1O15321 606 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 SNX4O95219 450 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 ZWINTO95229 277 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 G6PDP11413 515 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 PRPS2P11908 318 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 COX6B1P14854 86 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 ASMTP46597 345 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 STARP49675 285 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 AGFG1P52594 562 aaKnown RBP10.95□□□□□ -0.66
TPM1-216ENST00000558910 CASP9P55211 416 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 PSG6Q00889 435 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 BST1Q10588 318 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 SNTB1Q13884 538 aaKnown RBP10.95□□□□□ -0.66
TPM1-216ENST00000558910 CEBPEQ15744 281 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 DECR1Q16698 335 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 XKR7Q5GH72 579 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 DCST1Q5T197 706 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 C1orf185Q5T7R7 199 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 CPTPQ5TA50 214 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 TIGD3Q6B0B8 471 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 RTL6Q6ICC9 239 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 TMEM211Q6ICI0 200 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 SLC30A6Q6NXT4 461 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 FIGNL1Q6PIW4 674 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 XKRXQ6PP77 449 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 LRIG3Q6UXM1 1119 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 B3GNT6Q6ZMB0 384 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 MARCH3Q86UD3 253 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 CLEC4FQ8N1N0 589 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 GATSQ8NAP1 163 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 FAM83FQ8NEG4 500 aaPredicted RBP10.95□□□□□ -0.66
TPM1-216ENST00000558910 OR4K17Q8NGC6 315 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 OR5M1Q8NGP8 315 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 OR5AK3PQ8NH89 298 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 ZFP28Q8NHY6 868 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 ZBED6CLQ96FA7 236 aaPredicted RBP10.95□□□□□ -0.66
TPM1-216ENST00000558910 Q9N2J8 555 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 FBXL2Q9UKC9 423 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 EIF3LQ9Y262 564 aaKnown RBP10.95□□□□□ -0.66
TPM1-216ENST00000558910 TMED5Q9Y3A6 229 aa10.95□□□□□ -0.66
TPM1-216ENST00000558910 FREM3P0C091 2139 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 GOLGA8QA0A0J9YX86 632 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 A0A1W2PRB8 838 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 GOLGA8OA6NCC3 632 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 OR6C70A6NIJ9 312 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 C9JVG2 144 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 GOLGA8NF8WBI6 632 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 TO15178 435 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 BIRC5O15392 142 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 SUSD5O60279 629 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 TSPAN2O60636 221 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 HCN1O60741 890 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 C6orf47O95873 294 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 IGKV1D-16P01601 117 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 TUBBP07437 444 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 GLI4P10075 376 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 PRF1P14222 555 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 NAGAP17050 411 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 PTPN6P29350 595 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 SERPINB5P36952 375 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 RPL14P50914 215 aaKnown RBP10.94□□□□□ -0.66
TPM1-216ENST00000558910 DIO3P55073 304 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 ART3Q13508 389 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 TP53BP2Q13625 1128 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 EFR3AQ14156 821 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 HYAL4Q2M3T9 481 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 BEND6Q5SZJ8 279 aaPredicted RBP10.94□□□□□ -0.66
TPM1-216ENST00000558910 CCNJQ5T5M9 372 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 NXNQ6DKJ4 435 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 R3HCC1LQ7Z5L2 792 aaKnown RBP10.94□□□□□ -0.66
TPM1-216ENST00000558910 WDSUB1Q8N9V3 476 aa10.94□□□□□ -0.66
TPM1-216ENST00000558910 ABTB1Q969K4 478 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms