RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ASIC5Q9NY37 505 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 GPR83Q9NYM4 423 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 TXNDC16Q9P2K2 825 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 ZNF223Q9UK11 482 aaPredicted RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 FBXW2Q9UKT8 454 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 CORO1CQ9ULV4 474 aaPredicted RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 DTNAQ9Y4J8 743 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 TIMM22Q9Y584 194 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 KCNE2Q9Y6J6 123 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 COX11Q9Y6N1 276 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 CACNA1DQ01668 2161 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 CPAMD8Q8IZJ3 1885 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 ZNF407Q9C0G0 2248 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 ICE1Q9Y2F5 2266 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 SPTA1P02549 2419 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 DIDO1Q9BTC0 2240 aaKnown RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 RP1L1Q8IWN7 2480 aaPredicted RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 FLNCQ14315 2725 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 A0A087WUV0 522 aaPredicted RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 EXOC1LA0A1B0GW35 172 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 A8MT66 165 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 TCP11X1B4DZS4 312 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 H0YIG0 161 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 MKRN2OSH3BPM6 223 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 J3QKU1 62 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 K7EPI3 171 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 PEX12O00623 359 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 PLPP1O14494 284 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 NDC80O14777 642 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 ERI3O43414 337 aaKnown RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 TMPRSS11DO60235 418 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 ZNF500O60304 480 aaPredicted RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 PRAMEF2O60811 474 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 KERAO60938 352 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 PROP1O75360 226 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 SORBS2O94875 1100 aaKnown RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 CCNDBP1O95273 360 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 WDPCPO95876 746 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 PDYNP01213 254 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 FHP07954 510 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 SERPINA6P08185 405 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 INHBAP08476 426 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 SNRPAP09012 282 aaKnown RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 CT62P0C5K7 136 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 C8orf89P0DMQ9 161 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 APEHP13798 732 aaKnown RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 GFAPP14136 432 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 GNAZP19086 355 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 ATP5A1P25705 553 aaKnown RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 BSGP35613 385 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 AHRP35869 848 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 CASP2P42575 452 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 HNMTP50135 292 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 HTR6P50406 440 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 LIM2P55344 173 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 OR4D2P58180 307 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 NANOS3P60323 173 aaKnown RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 PMP22Q01453 160 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 KLRB1Q12918 225 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 TRAF3Q13114 568 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 SLAMF1Q13291 335 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 ZRSR2Q15696 482 aaKnown RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 INPP5JQ15735 1006 aaPredicted RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 NSDHLQ15738 373 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 PDK4Q16654 411 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 ADPRMQ3LIE5 342 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 TUBB8Q3ZCM7 444 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 GARNL3Q5VVW2 1013 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 SPINK14Q6IE38 97 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 PRMT9Q6P2P2 845 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 TMEM64Q6YI46 380 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 TIFABQ6ZNK6 161 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 TRMT10CQ7L0Y3 403 aaKnown RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 CPEB2Q7Z5Q1 589 aaKnown RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 ADAMTSL2Q86TH1 951 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 TBC1D1Q86TI0 1168 aaPredicted RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 PRIMA1Q86XR5 153 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 RAB43Q86YS6 212 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 CRLF3Q8IUI8 442 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 P3H2Q8IVL5 708 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 LAS2Q8IYD9 372 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 C4orf33Q8N1A6 199 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 ACOT4Q8N9L9 421 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 FAM47BQ8NA70 645 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 OR4F6Q8NGB9 312 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 OR1N1Q8NGS0 311 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 HUS1BQ8NHY5 278 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 RHEBL1Q8TAI7 183 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 WDR20Q8TBZ3 569 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 UBLCP1Q8WVY7 318 aaPredicted RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 ATL1Q8WXF7 558 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 MIB2Q96AX9 1013 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 TBC1D20Q96BZ9 403 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 DAZAP1Q96EP5 407 aaKnown RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 WDR34Q96EX3 536 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 SIGLEC12Q96PQ1 595 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 C17orf62Q9BQA9 187 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 AIF1LQ9BQI0 150 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 MS4A8Q9BY19 250 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 PCBD2Q9H0N5 130 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms