RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 ESX1Q8N693 406 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 CLEC4CQ8WTT0 213 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 JSRP1Q96MG2 331 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 GAL3ST4Q96RP7 486 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SUV39H2Q9H5I1 410 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 RXFP3Q9NSD7 469 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 OR4D6Q8NGJ1 314 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ZBED6CLQ96FA7 236 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 MEGF10Q96KG7 1140 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 CDH10Q9Y6N8 788 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 THOC2Q8NI27 1593 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SLC9B1P1A6NJY1 282 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 FABP9Q0Z7S8 132 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 TSSK4Q6SA08 328 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 LRRC70Q7Z2Q7 622 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 OR5M8Q8NGP6 311 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 FAM110BQ8TC76 370 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SPACA1Q9HBV2 294 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 PARD6AQ9NPB6 346 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 DERAQ9Y315 318 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 URGCP-MRPS24S4R325 110 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 WASH4PA8MWX3 477 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 AIFM1O95831 613 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 EMP3P54852 163 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 PCGF3Q3KNV8 242 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 TCEAL6Q6IPX3 200 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 RDH10Q8IZV5 341 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 OR13C4Q8NGS5 318 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SEMA4GQ9NTN9 838 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 MCRIP1C9JLW8 97 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 CNOT4O95628 575 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 DPYSL2Q16555 572 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ZFAND4Q86XD8 727 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SIGLECL1Q8N7X8 197 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 OR13C5Q8NGS8 318 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 OR13C2Q8NGS9 318 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 OR8D1Q8WZ84 308 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF778Q96MU6 729 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 NKX6-2Q9C056 277 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ANTXRLA6NF34 631 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 CD9P21926 228 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 FASLGP48023 281 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 GBX1Q14549 363 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 LINC00299Q6ZSB3 139 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 TMPRSS9Q7Z410 1059 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 RERGQ96A58 199 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 TSPAN10Q9H1Z9 355 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 PIGMQ9H3S5 423 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 LIPT1Q9Y234 373 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 NCOA3Q9Y6Q9 1424 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 CTTNBP2Q8WZ74 1663 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 MAGI2Q86UL8 1455 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ARGFXA6NJG6 315 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 B3GALT2O43825 422 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 EBLN1P0CF75 366 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SUCLG1P53597 346 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 FAM69AQ5T7M9 428 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 CEP68Q76N32 757 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 FUNDC1Q8IVP5 155 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF596Q8TC21 504 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 KIF25Q9UIL4 384 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 MDC1Q14676 2089 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 DAOP14920 347 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 RGS8P57771 180 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 IRF5Q13568 498 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SLC9A3R2Q15599 337 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 UPP1Q16831 310 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 CILP2Q8IUL8 1156 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 VGLL2Q8N8G2 317 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ACER3Q9NUN7 267 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 PRRC2BQ5JSZ5 2229 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 MTHFD2P13995 350 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ARSDP51689 593 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 RPUSD3Q6P087 351 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 Q6ZSR9 355 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SGPP2Q8IWX5 399 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 FUBP1Q96AE4 644 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 HCAR1Q9BXC0 346 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 BAMBIQ13145 260 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 DNERQ8NFT8 737 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SYNPRQ8TBG9 265 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ASXL1Q8IXJ9 1541 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ADRB3P13945 408 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF239Q16600 458 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 DPPA4Q7L190 304 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SSX7Q7RTT5 188 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SMPDL3AQ92484 453 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 FOXRED1Q96CU9 486 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 C2orf78A6NCI8 922 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 C1QTNF8P60827 252 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SLC7A9P82251 487 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 RPL24P83731 157 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 AQP6Q13520 282 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 PCLAFQ15004 111 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF791Q3KP31 576 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 LIPNQ5VXI9 398 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 CD276Q5ZPR3 534 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SCARB1Q8WTV0 552 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 AKIP1Q9NQ31 210 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms