RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 H0YC42 278 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 H3BML4 177 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 FOXE1O00358 373 aaPredicted RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 NDUFS7O75251 213 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 BANF1O75531 89 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 AQP8O94778 261 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 SYNGR4O95473 234 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 CD8AP01732 235 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 GBAP04062 536 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 PABPC4LP0CB38 370 aaKnown RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 CD1DP15813 335 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 USF1P22415 310 aaPredicted RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 IL32P24001 234 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 CALRP27797 417 aaKnown RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 ADH6P28332 368 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 IL12BP29460 328 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 CXCR5P32302 372 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 FEN1P39748 380 aaKnown RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 CLK3P49761 638 aaKnown RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 GZMKP49863 264 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 ZNF75DP51815 510 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 TPD52P55327 224 aaPredicted RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 SRSF2Q01130 221 aaKnown RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 RELBQ01201 579 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 MGAT2Q10469 447 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 GANABQ14697 944 aaKnown RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 EXOSC7Q15024 291 aaKnown RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 GUSBP1Q15486 140 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 OR4D1Q15615 310 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 PGGHGQ32M88 737 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 ELOA3BQ3SY89 546 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 HP1BP3Q5SSJ5 553 aaPredicted RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 CCNYL2Q5T2Q4 361 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 UBAP2Q5T6F2 1119 aaKnown RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 FAM166AQ6J272 317 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 PPP4R4Q6NUP7 873 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 TRMT10BQ6PF06 316 aaKnown RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 LARP4Q71RC2 724 aaKnown RBP eCLIP4.63□□□□□ -1.67
SPG11-208ENST00000558155 SSX8Q7RTT4 187 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 PAGE2Q7Z2X7 111 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 DTX2Q86UW9 622 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 Q8N3U1 123 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 SPATA6LQ8N4H0 392 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 RFLNBQ8N5W9 214 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 METTL25Q8N6Q8 603 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 TEX9Q8N6V9 391 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 ARIH2OSQ8N7S6 290 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 FADS6Q8N9I5 356 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 ELOA3Q8NG57 546 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 OR52B6Q8NGF0 335 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 OR52R1Q8NGF1 315 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 PIWIL2Q8TC59 973 aaKnown RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 TRPC4APQ8TEL6 797 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 PROX1Q92786 737 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 NEUROG1Q92886 237 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 S100PBPQ96BU1 408 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 LRRC39Q96DD0 335 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 RADILQ96JH8 1075 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 SERPINI1Q99574 410 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 ZNF717Q9BY31 904 aaPredicted RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 DDX47Q9H0S4 455 aaKnown RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 RHOJQ9H4E5 214 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 FBXO34Q9NWN3 711 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 MAT2BQ9NZL9 334 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 MED11Q9P086 117 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 ZNF639Q9UID6 485 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 ADAM29Q9UKF5 820 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 MCTS1Q9ULC4 181 aaKnown RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 CLEC4AQ9UMR7 237 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 B3GALT5Q9Y2C3 310 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 GPR55Q9Y2T6 319 aaPredicted RBP4.63□□□□□ -1.67
SPG11-208ENST00000558155 PLLPQ9Y342 182 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 ZNF780BQ9Y6R6 833 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 MALRD1Q5VYJ5 2156 aa4.63□□□□□ -1.67
SPG11-208ENST00000558155 CADP27708 2225 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 A0A096LNT2 108 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 LOC100289279A0A1B0GTE1 492 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 A0A1W2PS29 197 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 DPRXA6NFQ7 191 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 H0YIV9 168 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 EIF1AYO14602 144 aaKnown RBP4.62□□□□□ -1.67
SPG11-208ENST00000558155 DNALI1O14645 258 aaPredicted RBP4.62□□□□□ -1.67
SPG11-208ENST00000558155 TCF21O43680 179 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 TSPAN2O60636 221 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 UGDHO60701 494 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 SS18L1O75177 396 aaPredicted RBP4.62□□□□□ -1.67
SPG11-208ENST00000558155 ERAL1O75616 437 aaKnown RBP4.62□□□□□ -1.67
SPG11-208ENST00000558155 SEMA3DO95025 777 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 CBX7O95931 251 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 ATP1B1P05026 303 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 KLK1P06870 262 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 TUBBP07437 444 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 CSF3P09919 207 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 CT45A8P0DMV1 189 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 CT45A9P0DMV2 189 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 IGHV4-31P0DP07 118 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 BMP4P12644 408 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 STMN1P16949 149 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 CFPP27918 469 aa4.62□□□□□ -1.67
SPG11-208ENST00000558155 EIF1AXP47813 144 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms