RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 MBD3L2Q8NHZ7 208 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-220ENST00000556486 FBXO25Q8TCJ0 367 aa9.1□□□□□ -0.95
SCFD1-220ENST00000556486 SPPL2AQ8TCT8 520 aa9.1□□□□□ -0.95
SCFD1-220ENST00000556486 NXNL1Q96CM4 212 aa9.1□□□□□ -0.95
SCFD1-220ENST00000556486 TMEM41AQ96HV5 264 aa9.1□□□□□ -0.95
SCFD1-220ENST00000556486 RILPQ96NA2 401 aa9.1□□□□□ -0.95
SCFD1-220ENST00000556486 RBM24Q9BX46 236 aaKnown RBP9.1□□□□□ -0.95
SCFD1-220ENST00000556486 DPH5Q9H2P9 285 aa9.1□□□□□ -0.95
SCFD1-220ENST00000556486 ADAM29Q9UKF5 820 aa9.1□□□□□ -0.95
SCFD1-220ENST00000556486 C15orf41Q9Y2V0 281 aa9.1□□□□□ -0.95
SCFD1-220ENST00000556486 GLOD5A6NK44 160 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 WASHC1A8K0Z3 465 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 PGRMC2O15173 223 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 TRAPPC6AO75865 159 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 KLHL2O95198 593 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 RHOXF2BP0C7M4 288 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 GFAPP14136 432 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 S1PR1P21453 382 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 SSTR4P31391 388 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 LSP1P33241 339 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 CPOXP36551 454 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 CASP3P42574 277 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 NRG3P56975 720 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 RPP38P78345 283 aaKnown RBP9.09□□□□□ -0.95
SCFD1-220ENST00000556486 PHC1P78364 1004 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 KRTAP1-1Q07627 177 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 SNTA1Q13424 505 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 LSAMPQ13449 338 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 GTF2H2Q13888 395 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 CPSF6Q16630 551 aaKnown RBP eCLIP9.09□□□□□ -0.95
SCFD1-220ENST00000556486 PFKFB4Q16877 469 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 GGTA1PQ4G0N0 100 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 BICRALQ6AI39 1079 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 TIGD3Q6B0B8 471 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 GTF2H2CQ6P1K8 395 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 CYP20A1Q6UW02 462 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 ZDHHC24Q6UX98 284 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 GOLGA7Q7Z5G4 137 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 ADGRE4PQ86SQ3 457 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 C9orf106Q8NAJ2 232 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 TRPC4APQ8TEL6 797 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 KCTD4Q8WVF5 259 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 PIK3IP1Q96FE7 263 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 SERPINI1Q99574 410 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 NTMT1Q9BV86 223 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 OR10A5Q9H207 317 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 CALHM2Q9HA72 323 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 GRPEL1Q9HAV7 217 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 EIF3LQ9Y262 564 aaKnown RBP9.09□□□□□ -0.95
SCFD1-220ENST00000556486 UTP11Q9Y3A2 253 aaKnown RBP9.09□□□□□ -0.95
SCFD1-220ENST00000556486 RNF11Q9Y3C5 154 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 ANGPTL3Q9Y5C1 460 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 EXPH5Q8NEV8 1989 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 MED12Q93074 2177 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 DSCAMO60469 2012 aa9.09□□□□□ -0.95
SCFD1-220ENST00000556486 A0A1W2PS29 197 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 OR7A17O14581 309 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 CASKO14936 926 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 ACOX3O15254 700 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 CLDN9O95484 217 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 ACSL3O95573 720 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 ACTL6AO96019 429 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 ALDOAP04075 364 aaKnown RBP9.08□□□□□ -0.96
SCFD1-220ENST00000556486 ATP1B1P05026 303 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 ABCB1P08183 1280 aaPredicted RBP9.08□□□□□ -0.96
SCFD1-220ENST00000556486 CT62P0C5K7 136 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 CPN1P15169 458 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 BMP7P18075 431 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 CTSSP25774 331 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 PIK3R1P27986 724 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 ABCD3P28288 659 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 PTPN6P29350 595 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 MAGEA12P43365 314 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 SLCO1A2P46721 670 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 PCYT1AP49585 367 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 PLTPP55058 493 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 FBXW4P57775 412 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 MRPS25P82663 173 aaKnown RBP9.08□□□□□ -0.96
SCFD1-220ENST00000556486 IRF9Q00978 393 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 TOMM20Q15388 145 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 FRG2Q64ET8 278 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 KLC3Q6P597 504 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 TMEM64Q6YI46 380 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 ZNF572Q7Z3I7 529 aaPredicted RBP9.08□□□□□ -0.96
SCFD1-220ENST00000556486 MYLK4Q86YV6 388 aaPredicted RBP9.08□□□□□ -0.96
SCFD1-220ENST00000556486 GCNT2Q8N0V5 402 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 LRRC75A-AS1Q8N1F1 130 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 OR4K14Q8NGD5 310 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 PPP1R14CQ8TAE6 165 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 ZPLD1Q8TCW7 415 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 SLC44A1Q8WWI5 657 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 CTHRC1Q96CG8 243 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 WDYHV1Q96HA8 205 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 ZFP3Q96NJ6 502 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 GNRHR2Q96P88 292 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 FRG2BQ96QU4 278 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 KCNJ15Q99712 375 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 UGT2B28Q9BY64 529 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 FUT8Q9BYC5 575 aa9.08□□□□□ -0.96
SCFD1-220ENST00000556486 RAB17Q9H0T7 212 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms