RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 WSCD1Q658N2 575 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 ISLR2Q6UXK2 745 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 UNC5DQ6UXZ4 953 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 SERINC5Q86VE9 423 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 SLC22A18ASQ8N1D0 253 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 TBCKQ8TEA7 893 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 RBM18Q96H35 190 aaKnown RBP2.17□□□□□ -2.06
SCFD1-218ENST00000556256 C9orf85Q96MD7 179 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 MCCC1Q96RQ3 725 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-218ENST00000556256 TESK2Q96S53 571 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 ASB8Q9H765 288 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 ACTR8Q9H981 624 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 TRPV5Q9NQA5 729 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 IMPAD1Q9NX62 359 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 TAS2R3Q9NYW6 316 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 SENP1Q9P0U3 644 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 ATXN10Q9UBB4 475 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 DHRS7Q9Y394 339 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 FKBP7Q9Y680 259 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 PARD3Q8TEW0 1356 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 CUX2O14529 1486 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 ABCC4O15439 1325 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 HIVEP2P31629 2446 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 METP08581 1390 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 A0A0J9YVX5 310 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 A0A0U1RQV5 110 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 FAM230AA0A1W2PPH8 454 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 TTC26A0AVF1 554 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 ZSCAN5CA6NGD5 496 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-218ENST00000556256 E9PAM4 449 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 LGALS8O00214 317 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 SAP18O00422 153 aaKnown RBP2.16□□□□□ -2.06
SCFD1-218ENST00000556256 LRRTM2O43300 516 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 TSC22D2O75157 780 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 CT45A10P0DMU9 189 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 RRASP10301 218 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 GHRP10912 638 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 RPL34P49207 117 aaKnown RBP2.16□□□□□ -2.06
SCFD1-218ENST00000556256 HMGCS2P54868 508 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 GMFBP60983 142 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 SRYQ05066 204 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 BNIP1Q12981 228 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 PDZK1IP1Q13113 114 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 INAQ16352 499 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 PPP1R3AQ16821 1122 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 MICAQ29983 383 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 LDLRAP1Q5SW96 308 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 SLC39A4Q6P5W5 647 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 TMEM184AQ6ZMB5 413 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 GCNT7Q6ZNI0 430 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 TSEN54Q7Z6J9 526 aaKnown RBP2.16□□□□□ -2.06
SCFD1-218ENST00000556256 DNAJA3Q96EY1 480 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 ZBED6CLQ96FA7 236 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-218ENST00000556256 APOL2Q9BQE5 337 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 CARD6Q9BX69 1037 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 KAT8Q9H7Z6 458 aaKnown RBP2.16□□□□□ -2.06
SCFD1-218ENST00000556256 MEPEQ9NQ76 525 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-218ENST00000556256 YAE1D1Q9NRH1 226 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 DCAF13Q9NV06 445 aaKnown RBP2.16□□□□□ -2.06
SCFD1-218ENST00000556256 KLRF1Q9NZS2 232 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 IL17CQ9P0M4 197 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 GHRLQ9UBU3 117 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 EXOSC1Q9Y3B2 195 aaKnown RBP2.16□□□□□ -2.06
SCFD1-218ENST00000556256 POGZQ7Z3K3 1410 aa2.16□□□□□ -2.06
SCFD1-218ENST00000556256 TRBV7-9A0A0J9YWB2 115 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 RGSL1A5PLK6 1076 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 TRABD2BA6NFA1 517 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 C11orf98E9PRG8 122 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 SLC17A2O00624 439 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 TOM1L1O75674 476 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 AKR7A3O95154 331 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 GJB5O95377 273 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 GIG44P09565 113 aaPredicted RBP2.15□□□□□ -2.07
SCFD1-218ENST00000556256 LAMP1P11279 417 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 ADRA1AP35348 466 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 HMGCLP35914 325 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 HTR5AP47898 357 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 ALDH3B2P48448 385 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 METAP1P53582 386 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 RPS6P62753 249 aaKnown RBP2.15□□□□□ -2.07
SCFD1-218ENST00000556256 NOP14P78316 857 aaKnown RBP2.15□□□□□ -2.07
SCFD1-218ENST00000556256 IL9RQ01113 521 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 PAX2Q02962 417 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 HSF2Q03933 536 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 TFDP1Q14186 410 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 EIF2B1Q14232 305 aaKnown RBP2.15□□□□□ -2.07
SCFD1-218ENST00000556256 CYBRD1Q53TN4 286 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 UTF1Q5T230 341 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 CGB2Q6NT52 195 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 PNCKQ6P2M8 343 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 PAMR1Q6UXH9 720 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 STAC2Q6ZMT1 411 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 P4HA3Q7Z4N8 544 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 LHFPL4Q7Z7J7 247 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 NAXDQ8IW45 347 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 CENPSQ8N2Z9 138 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 ANKRD20A12PQ8NF67 263 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 OR52J3Q8NH60 311 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 ZNF671Q8TAW3 534 aa2.15□□□□□ -2.07
SCFD1-218ENST00000556256 GTSF1Q8WW33 167 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms