RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PRDM4Q9UKN5 801 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 SLC7A7Q9UM01 511 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 TMA7Q9Y2S6 64 aaKnown RBP10.15□□□□□ -0.78
ACTN1-216ENST00000556083 RNF212BA8MTL3 300 aa10.15□□□□□ -0.79
ACTN1-216ENST00000556083 C11orf98E9PRG8 122 aa10.15□□□□□ -0.79
ACTN1-216ENST00000556083 F5H0A9 414 aaPredicted RBP10.15□□□□□ -0.79
ACTN1-216ENST00000556083 SCAMP1O15126 338 aa10.15□□□□□ -0.79
ACTN1-216ENST00000556083 P2RX6O15547 441 aa10.15□□□□□ -0.79
ACTN1-216ENST00000556083 PEX14O75381 377 aa10.15□□□□□ -0.79
ACTN1-216ENST00000556083 DNASE1P24855 282 aa10.15□□□□□ -0.79
ACTN1-216ENST00000556083 PRLHRP49683 370 aa10.15□□□□□ -0.79
ACTN1-216ENST00000556083 FXYD6P3P58550 94 aa10.15□□□□□ -0.79
ACTN1-216ENST00000556083 SLC35G1Q2M3R5 365 aa10.15□□□□□ -0.79
ACTN1-216ENST00000556083 PIAS4Q8N2W9 510 aaPredicted RBP10.15□□□□□ -0.79
ACTN1-216ENST00000556083 SFXN2Q96NB2 322 aa10.15□□□□□ -0.79
ACTN1-216ENST00000556083 GAL3ST1Q99999 423 aa10.15□□□□□ -0.79
ACTN1-216ENST00000556083 ANKRD60Q9BZ19 345 aa10.15□□□□□ -0.79
ACTN1-216ENST00000556083 RIMS3Q9UJD0 308 aa10.15□□□□□ -0.79
ACTN1-216ENST00000556083 FBXO7Q9Y3I1 522 aa10.15□□□□□ -0.79
ACTN1-216ENST00000556083 ANKRD30BLA7E2S9 258 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 FAM155AB1AL88 458 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-216ENST00000556083 DBPQ10586 325 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-216ENST00000556083 NFATC4Q14934 902 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 FAM26DQ5JW98 314 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 WBP2NLQ6ICG8 309 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 KCTD9Q7L273 389 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 IGDCC3Q8IVU1 814 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 BEST3Q8N1M1 668 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 ANKK1Q8NFD2 765 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 ZNF300Q96RE9 604 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-216ENST00000556083 FIZ1Q96SL8 496 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 MOKQ9UQ07 419 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 MMACHCQ9Y4U1 282 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 ROBO1Q9Y6N7 1651 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 LRP6O75581 1613 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 C2orf78A6NCI8 922 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 SYT7O43581 403 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 RAB40ALP0C0E4 278 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 DHRS4L1P0CG22 281 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 PTGS2P35354 604 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 TAP2Q03519 686 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 CDNFQ49AH0 187 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 TRIM46Q7Z4K8 759 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 SYNPOQ8N3V7 929 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 VN1R2Q8NFZ6 395 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 CD200R1Q8TD46 325 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 RAB40AQ8WXH6 277 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 C1QTNF2Q9BXJ5 285 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 ALOXE3Q9BYJ1 711 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 ANKRD19PQ9H560 264 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 UBQLN4Q9NRR5 601 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 GSKIPQ9P0R6 139 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 KCNS2Q9ULS6 477 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 SLC1A7O00341 560 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 ZNF16P17020 682 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-216ENST00000556083 NPR2P20594 1047 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 SHC2P98077 582 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 METAP1DQ6UB28 335 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-216ENST00000556083 TRIM74Q86UV6 250 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 CMIPQ8IY22 773 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 MRPL43Q8N983 215 aaKnown RBP10.14□□□□□ -0.79
ACTN1-216ENST00000556083 ZNF454Q8N9F8 522 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 OR8K5Q8NH50 307 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 POC1BQ8TC44 478 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 IL26Q9NPH9 171 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 ZNF337Q9Y3M9 751 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 HSPB11Q9Y547 144 aa10.14□□□□□ -0.79
ACTN1-216ENST00000556083 SEC14L2O76054 403 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 SLC16A8O95907 504 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CHRM5P08912 532 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CDKN2DP55273 166 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 GRB7Q14451 532 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 BEND4Q6ZU67 534 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 MRPL21Q7Z2W9 205 aaKnown RBP10.13□□□□□ -0.79
ACTN1-216ENST00000556083 OR5D14Q8NGL3 314 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 OR5M3Q8NGP4 307 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 MSI2Q96DH6 328 aaKnown RBP10.13□□□□□ -0.79
ACTN1-216ENST00000556083 IP6K3Q96PC2 410 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 FEVQ99581 238 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CWH43Q9H720 699 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CUTCQ9NTM9 273 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 VNN3Q9NY84 501 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 SOX2P48431 317 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 TAS2R20P59543 309 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 NTRK2Q16620 822 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 SGPP2Q8IWX5 399 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 SYT14Q8NB59 555 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 RCBTB1Q8NDN9 531 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 OR5J2Q8NH18 312 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 ZFAND1Q8TCF1 268 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 BARD1Q99728 777 aaKnown RBP10.13□□□□□ -0.79
ACTN1-216ENST00000556083 CACNG6Q9BXT2 260 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 SIAEQ9HAT2 523 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 FAIMQ9NVQ4 179 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 HHLA2Q9UM44 414 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 B3GNT3Q9Y2A9 372 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 GLOD5A6NK44 160 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 SOCS2O14508 198 aa10.13□□□□□ -0.79
ACTN1-216ENST00000556083 FOXD2O60548 495 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-216ENST00000556083 SC5DO75845 299 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms