RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 TSPAN2O60636 221 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 NME6O75414 186 aaPredicted RBP7.03□□□□□ -1.28
TDP1-214ENST00000556063 STX11O75558 287 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 SLC25A12O75746 678 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 KCNK2O95069 426 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 UNC5CO95185 931 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 SNX4O95219 450 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 GUSBP08236 651 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 NR2F1P10589 423 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 BMP2P12643 396 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 CD1EP15812 388 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 GPX2P18283 190 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 ENDOUP21128 410 aaKnown RBP7.03□□□□□ -1.28
TDP1-214ENST00000556063 CALB2P22676 271 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 MAN2A2P49641 1150 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 TNFSF10P50591 281 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 CBX1P83916 185 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 RBBP4Q09028 425 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 KLRB1Q12918 225 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 SNTA1Q13424 505 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 CAPRIN1Q14444 709 aaKnown RBP7.03□□□□□ -1.28
TDP1-214ENST00000556063 ZNF169Q14929 603 aaPredicted RBP7.03□□□□□ -1.28
TDP1-214ENST00000556063 NTRK2Q16620 822 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 CYP51A1Q16850 503 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.03□□□□□ -1.28
TDP1-214ENST00000556063 ARHGAP11BQ3KRB8 267 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 GPAT3Q53EU6 434 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 ZNF766Q5HY98 468 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 DCST2Q5T1A1 773 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.03□□□□□ -1.282e-6■■■■□ 26.1
TDP1-214ENST00000556063 GCNT6Q5T4J0 391 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 SPINK14Q6IE38 97 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 NANOGP8Q6NSW7 305 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 FIGNL1Q6PIW4 674 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 C16orf89Q6UX73 402 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 LYPD8Q6UX82 237 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 Q6ZS92 163 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 SLC30A8Q8IWU4 369 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 ZNF527Q8NB42 609 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 PSD4Q8NDX1 1056 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 CHDHQ8NE62 594 aaPredicted RBP7.03□□□□□ -1.28
TDP1-214ENST00000556063 OR5D16Q8NGK9 328 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 OR5M3Q8NGP4 307 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 OIT3Q8WWZ8 545 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 PIK3R3Q92569 461 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 PMM1Q92871 262 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 RAB8BQ92930 207 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 TRNT1Q96Q11 434 aaKnown RBP7.03□□□□□ -1.28
TDP1-214ENST00000556063 ECSITQ9BQ95 431 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 CPPED1Q9BRF8 314 aaPredicted RBP7.03□□□□□ -1.28
TDP1-214ENST00000556063 SPATA9Q9BWV2 254 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 METTL7AQ9H8H3 244 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 NANOGQ9H9S0 305 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 SDHAF3Q9NRP4 125 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 UBQLN4Q9NRR5 601 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 SLC6A13Q9NSD5 602 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 SLC25A37Q9NYZ2 338 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 PCDHGB6Q9Y5F9 930 aa7.03□□□□□ -1.28
TDP1-214ENST00000556063 EXPH5Q8NEV8 1989 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 PIEZO2Q9H5I5 2752 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 ANKRD33BA6NCL7 494 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 H3BNH8 94 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 HMGN4O00479 90 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 SCDO00767 359 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 ATXN7O15265 892 aaPredicted RBP7.02□□□□□ -1.29
TDP1-214ENST00000556063 SLC28A2O43868 658 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 NME2P1O60361 137 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 HNRNPCL1O60812 293 aaKnown RBP7.02□□□□□ -1.29
TDP1-214ENST00000556063 DNAJA2O60884 412 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 UGT2B11O75310 529 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 ATP5HO75947 161 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 NEURL1O76050 574 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 F10P00742 488 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 SP1P08047 785 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 NGFRP08138 427 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 CYP4B1P13584 511 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 ETFAP13804 333 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 HOXB9P17482 250 aaPredicted RBP7.02□□□□□ -1.29
TDP1-214ENST00000556063 CNR1P21554 472 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 NME2P22392 152 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 SLC6A2P23975 617 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 MASP1P48740 699 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 RASSF2P50749 326 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 CRISP3P54108 245 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 CASP9P55211 416 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 FBXW4P57775 412 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 INAQ16352 499 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 ZNF630Q2M218 657 aaPredicted RBP7.02□□□□□ -1.29
TDP1-214ENST00000556063 FLYWCH1Q4VC44 716 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 COX20Q5RI15 118 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 ZNF468Q5VIY5 522 aaPredicted RBP7.02□□□□□ -1.29
TDP1-214ENST00000556063 PRAMEF8Q5VWM4 474 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 PRAMEF7Q5VXH5 474 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 HEPHL1Q6MZM0 1159 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 SLC30A6Q6NXT4 461 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 ERICH5Q6P6B1 374 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 TMEM81Q6P7N7 255 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 LRRC74BQ6ZQY2 392 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 SERPINA11Q86U17 422 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 PACS2Q86VP3 889 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms