RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 GUSBP08236 651 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 TFPTP0C1Z6 253 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 UQCRBP14927 111 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 ETS2P15036 469 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 AQP1P29972 269 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 MAN2A2P49641 1150 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 SSR4P51571 173 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 MVDP53602 400 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 MEP1AQ16819 746 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.36□□□□□ -0.75
SHMT2-220ENST00000555634 ZSWIM7Q19AV6 140 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 LIN52Q52LA3 116 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 GLYATQ6IB77 296 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 LCN8Q6JVE9 175 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 HEPHL1Q6MZM0 1159 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 GPALPP1Q8IXQ4 340 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 ZNF614Q8N883 585 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 ZNF321PQ8N8H1 164 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 FAM156AQ8NDB6 213 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 CHDHQ8NE62 594 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-220ENST00000555634 THAP3Q8WTV1 239 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-220ENST00000555634 PIK3R3Q92569 461 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 PROX1Q92786 737 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 HOXB13Q92826 284 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-220ENST00000555634 TMCO6Q96DC7 493 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 OMA1Q96E52 524 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 IMMP1LQ96LU5 166 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 COL21A1Q96P44 957 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 NXF5Q9H1B4 397 aaKnown RBP10.36□□□□□ -0.75
SHMT2-220ENST00000555634 SERHL2Q9H4I8 314 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 MYOTQ9UBF9 498 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 CD300AQ9UGN4 299 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 PACSIN3Q9UKS6 424 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 BAG5Q9UL15 447 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 ERVK-11Q9UQG0 969 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 POMPQ9Y244 141 aa10.36□□□□□ -0.75
SHMT2-220ENST00000555634 YARS2Q9Y2Z4 477 aaKnown RBP10.36□□□□□ -0.75
SHMT2-220ENST00000555634 OR6C70A6NIJ9 312 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 AQP12BA6NM10 295 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 WWP2O00308 870 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 TO15178 435 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 SUV39H1O43463 412 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 KIAA0513O60268 411 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 ITGA10O75578 1167 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 PPM1BO75688 479 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 OR2J2O76002 312 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 KCNK2O95069 426 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 PGM3O95394 542 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 IL33O95760 270 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 SERPINA1P01009 418 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 CLPSP04118 112 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 GPIP06744 558 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 NUDT7P0C024 238 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 CT45A8P0DMV1 189 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 CT45A9P0DMV2 189 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 IL7RP16871 459 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 NAGAP17050 411 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 ABCD3P28288 659 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 IFNA8P32881 189 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 PNLIPRP2P54317 469 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 CHAF1BQ13112 559 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 DUSP8Q13202 625 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 GPR68Q15743 365 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 SYPL1Q16563 259 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 FAM98BQ52LJ0 330 aaKnown RBP10.35□□□□□ -0.75
SHMT2-220ENST00000555634 CT45A2Q5DJT8 189 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 CRB2Q5IJ48 1285 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 AGAP7PQ5VUJ5 663 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 PGM2L1Q6PCE3 622 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 FIGNL1Q6PIW4 674 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 FKBP9P1Q75LS8 142 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 RPS19BP1Q86WX3 136 aaKnown RBP10.35□□□□□ -0.75
SHMT2-220ENST00000555634 PTOV1Q86YD1 416 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 AQP12AQ8IXF9 295 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 GALNT16Q8N428 558 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 BCORP1Q8N888 145 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 GOLM1Q8NBJ4 401 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 SIMC1Q8NDZ2 872 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 FAM13CQ8NE31 585 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 WDR60Q8WVS4 1066 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 DIO2Q92813 273 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 TMBIM1Q969X1 311 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 ADIPOR1Q96A54 375 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 SLC35A4Q96G79 324 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 AGAP4Q96P64 663 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 UGT2B28Q9BY64 529 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 TBL1XR1Q9BZK7 514 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 ZNF350Q9GZX5 532 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 EVA1AQ9H8M9 152 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 GORASP2Q9H8Y8 452 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 MTHFD2LQ9H903 347 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-220ENST00000555634 BCL2L10Q9HD36 194 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 UBQLN4Q9NRR5 601 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 HPF1Q9NWY4 346 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 ABCG2Q9UNQ0 655 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 DTX4Q9Y2E6 619 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 SLC9A8Q9Y2E8 581 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 PCDHGA10Q9Y5H3 936 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 NPFFR2Q9Y5X5 522 aa10.35□□□□□ -0.75
SHMT2-220ENST00000555634 SPEGQ15772 3267 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms