RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 LATO43561 262 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 GLULP15104 373 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 CASP9P55211 416 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 KIAA1024LP59773 190 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 PPP1R8Q12972 351 aaKnown RBP2.37□□□□□ -2.03
SCFD1-216ENST00000555550 ELAVL3Q14576 367 aaKnown RBP2.37□□□□□ -2.03
SCFD1-216ENST00000555550 CYP51A1Q16850 503 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 SLC39A12Q504Y0 691 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 OR2B11Q5JQS5 317 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 PRAMEF7Q5VXH5 474 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 ZNF57Q68EA5 555 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-216ENST00000555550 OR5M10Q6IEU7 315 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 PNCKQ6P2M8 343 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 DCAF4L2Q8NA75 395 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 NEIL2Q969S2 332 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 SMIM14Q96QK8 99 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 TMEM245Q9H330 911 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 OR51J1Q9H342 316 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 FAM124BQ9H5Z6 455 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-216ENST00000555550 STARD5Q9NSY2 213 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 RAB26Q9ULW5 256 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 GRIN2DO15399 1336 aa2.37□□□□□ -2.03
SCFD1-216ENST00000555550 A0A1W2PRV1 198 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 H3BMH7 237 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 NME2P1O60361 137 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 LYPLA1O75608 230 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-216ENST00000555550 ATP5DP30049 168 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 CCL11P51671 97 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 RPS6P62753 249 aaKnown RBP2.36□□□□□ -2.03
SCFD1-216ENST00000555550 ROR1Q01973 937 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 TLE4Q04727 773 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 KCNJ11Q14654 390 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 MPPED2Q15777 294 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 CARTPTQ16568 116 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 SLX4IPQ5VYV7 408 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 P4HA3Q7Z4N8 544 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 ALLCQ8N6M5 410 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 ZNF433Q8N7K0 673 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-216ENST00000555550 LEMD2Q8NC56 503 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 DCUN1D4Q92564 292 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 C18orf25Q96B23 403 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-216ENST00000555550 FGGYQ96C11 551 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 NACA2Q9H009 215 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 GLIPR2Q9H4G4 154 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 PNO1Q9NRX1 252 aaKnown RBP2.36□□□□□ -2.03
SCFD1-216ENST00000555550 DUS2Q9NX74 493 aaKnown RBP2.36□□□□□ -2.03
SCFD1-216ENST00000555550 EHFQ9NZC4 300 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 FZR1Q9UM11 496 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 NPC1L1Q9UHC9 1359 aa2.36□□□□□ -2.03
SCFD1-216ENST00000555550 HSF2BPO75031 334 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 STK17BO94768 372 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 GNSP15586 552 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 CCNE1P24864 410 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 CNN1P51911 297 aaKnown RBP2.35□□□□□ -2.03
SCFD1-216ENST00000555550 OTUD4Q01804 1114 aaKnown RBP2.35□□□□□ -2.03
SCFD1-216ENST00000555550 OC90Q02509 493 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-216ENST00000555550 SRYQ05066 204 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 DPYSL3Q14195 570 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 EBI3Q14213 229 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 ZNF699Q32M78 642 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 EOGTQ5NDL2 527 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 DCST2Q5T1A1 773 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 ZNF589Q86UQ0 364 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-216ENST00000555550 PHYHIPQ92561 330 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 IL22RA2Q969J5 263 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 PSMG2Q969U7 264 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 MCHR2Q969V1 340 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 NOL4LQ96MY1 436 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-216ENST00000555550 MBD2Q9UBB5 411 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 FAM153AQ9UHL3 310 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 SMC3Q9UQE7 1217 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 PPIAL4AQ9Y536 164 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 ANKRD30BQ9BXX2 1392 aa2.35□□□□□ -2.03
SCFD1-216ENST00000555550 MACROD2A1Z1Q3 448 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 LRP3O75074 770 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 BBOX1O75936 387 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 SEMG1P04279 462 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 STSP08842 583 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 VDAC1P21796 283 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 HOXD10P28358 340 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 PPOXP50336 477 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 SSTP61278 116 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 TSTA3Q13630 321 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-216ENST00000555550 PKN2Q16513 984 aaKnown RBP2.34□□□□□ -2.03
SCFD1-216ENST00000555550 PARP6Q2NL67 630 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 TEX44Q53QW1 395 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 LIPKQ5VXJ0 399 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 YRDCQ86U90 279 aaKnown RBP2.34□□□□□ -2.03
SCFD1-216ENST00000555550 ZNF410Q86VK4 478 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 AMZ2Q86W34 360 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 CCDC170Q8IYT3 715 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 C10orf53Q8N6V4 93 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 ATP6V1E2Q96A05 226 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 PATZ1Q9HBE1 687 aaKnown RBP2.34□□□□□ -2.03
SCFD1-216ENST00000555550 RBM28Q9NW13 759 aaKnown RBP2.34□□□□□ -2.03
SCFD1-216ENST00000555550 MARCH5Q9NX47 278 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 CD274Q9NZQ7 290 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 L3MBTL1Q9Y468 752 aa2.34□□□□□ -2.03
SCFD1-216ENST00000555550 A0A1B0GUA9 196 aa2.33□□□□□ -2.04
SCFD1-216ENST00000555550 TLR4O00206 839 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms