RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 RPL3P39023 403 aaKnown RBP18.68■□□□□ 0.58
VTI1B-205ENST00000555543 DIO3P55073 304 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 MLC1Q15049 377 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 DECR1Q16698 335 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 CPTPQ5TA50 214 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 OR5M10Q6IEU7 315 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 YRDCQ86U90 279 aaKnown RBP18.68■□□□□ 0.58
VTI1B-205ENST00000555543 CCDC71Q8IV32 467 aaPredicted RBP18.68■□□□□ 0.58
VTI1B-205ENST00000555543 ULK2Q8IYT8 1036 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 COQ8BQ96D53 544 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 FAM120BQ96EK7 910 aaKnown RBP18.68■□□□□ 0.58
VTI1B-205ENST00000555543 OTUB1Q96FW1 271 aaPredicted RBP18.68■□□□□ 0.58
VTI1B-205ENST00000555543 MS4A4EQ96PG1 132 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 TIMP4Q99727 224 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 TTYH2Q9BSA4 534 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 NUF2Q9BZD4 464 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 RTN4RQ9BZR6 473 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 NOP53Q9NZM5 478 aaKnown RBP18.68■□□□□ 0.58
VTI1B-205ENST00000555543 FBXL2Q9UKC9 423 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 MED12Q93074 2177 aa18.68■□□□□ 0.58
VTI1B-205ENST00000555543 A0A1W2PRB8 838 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 KDM4EB2RXH2 506 aaPredicted RBP18.67■□□□□ 0.58
VTI1B-205ENST00000555543 EMC8O43402 210 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 SCO2O43819 266 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 FADS1O60427 444 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 NKX2-2O95096 273 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 IL33O95760 270 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 GLI4P10075 376 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 PRPS1L1P21108 318 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 RFX3P48380 749 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 SLC18A1P54219 525 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 C21orf58P58505 322 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 MAD2L1Q13257 205 aaPredicted RBP18.67■□□□□ 0.58
VTI1B-205ENST00000555543 SMU1Q2TAY7 513 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 C1orf185Q5T7R7 199 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 MFSD12Q6NUT3 480 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 B3GNT6Q6ZMB0 384 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 GALNT10Q86SR1 603 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 PLCZ1Q86YW0 608 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 SLC16A11Q8NCK7 471 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 RND1Q92730 232 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 RMND5BQ96G75 393 aaPredicted RBP18.67■□□□□ 0.58
VTI1B-205ENST00000555543 C16orf58Q96GQ5 468 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 C3orf14Q9HBI5 128 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 ALKBH4Q9NXW9 302 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 COQ3Q9NZJ6 369 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 FBN2P35556 2912 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 DCHS2Q6V1P9 2916 aa18.67■□□□□ 0.58
VTI1B-205ENST00000555543 SNNO75324 88 aaPredicted RBP18.66■□□□□ 0.58
VTI1B-205ENST00000555543 CBR3O75828 277 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 C6orf47O95873 294 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 DDX5P17844 614 aaKnown RBP18.66■□□□□ 0.58
VTI1B-205ENST00000555543 BMP7P18075 431 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 CLDN8P56748 225 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 MRPS22P82650 360 aaKnown RBP18.66■□□□□ 0.58
VTI1B-205ENST00000555543 NHSL2Q5HYW2 709 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 EXOSC6Q5RKV6 272 aaKnown RBP18.66■□□□□ 0.58
VTI1B-205ENST00000555543 VASNQ6EMK4 673 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 CDRT4Q8N9R6 151 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 CEP70Q8NHQ1 597 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 GPR151Q8TDV0 419 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 CA5BP1Q8WTZ4 195 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 SLC9A6Q92581 669 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 ARL8AQ96BM9 186 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 YIPF4Q9BSR8 244 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 UGT2B28Q9BY64 529 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 OR2B2Q9GZK3 357 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 CXorf36Q9H7Y0 433 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 MEAF6Q9HAF1 191 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 ZCCHC3Q9NUD5 404 aaKnown RBP18.66■□□□□ 0.58
VTI1B-205ENST00000555543 ATAD3AQ9NVI7 634 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 PCDHGB3Q9Y5G1 929 aa18.66■□□□□ 0.58
VTI1B-205ENST00000555543 LRBAP50851 2863 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 TTC36A6NLP5 189 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 GABRA1P14867 456 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 CHRNB4P30926 498 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 ADH7P40394 386 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 DUSP5Q16690 384 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 VPS26BQ4G0F5 336 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 SEM1Q6ZVN7 128 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 ACAD11Q709F0 780 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 CAMKMTQ7Z624 323 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 KIRREL3Q8IZU9 778 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 PSMA8Q8TAA3 256 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 OR5P2Q8WZ92 322 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 MARVELD3Q96A59 401 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 DUSP26Q9BV47 211 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 PRDM14Q9GZV8 571 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 CHST11Q9NPF2 352 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 NKIRAS1Q9NYS0 192 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 MARCOQ9UEW3 520 aaPredicted RBP18.65■□□□□ 0.58
VTI1B-205ENST00000555543 SNX8Q9Y5X2 465 aa18.65■□□□□ 0.58
VTI1B-205ENST00000555543 ABCA12Q86UK0 2595 aa18.64■□□□□ 0.57
VTI1B-205ENST00000555543 SDHDO14521 159 aa18.64■□□□□ 0.57
VTI1B-205ENST00000555543 KCNH1O95259 989 aa18.64■□□□□ 0.57
VTI1B-205ENST00000555543 UTS2O95399 124 aa18.64■□□□□ 0.57
VTI1B-205ENST00000555543 HMGN2P05204 90 aaKnown RBP18.64■□□□□ 0.57
VTI1B-205ENST00000555543 KIR3DL1P43629 444 aa18.64■□□□□ 0.57
VTI1B-205ENST00000555543 WNT3P56703 355 aa18.64■□□□□ 0.57
VTI1B-205ENST00000555543 PRR5P85299 388 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms