RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 OR7G3Q8NG95 312 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 ZNF596Q8TC21 504 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 FGGYQ96C11 551 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 TMEM206Q9H813 350 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 NANSQ9NR45 359 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 STARD5Q9NSY2 213 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 LHX3Q9UBR4 397 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 PURGQ9UJV8 347 aaKnown RBP1.35□□□□□ -2.19
SRP54-207ENST00000555535 ZNF225Q9UK10 706 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 ZNF835Q9Y2P0 537 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 CDH10Q9Y6N8 788 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 METP08581 1390 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 A0A096LNJ9 63 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 MACROD2A1Z1Q3 448 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 E9PLD3 99 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 RIPK2O43353 540 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 MED6O75586 246 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 SCRG1O75711 98 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 OR8U8P0C7N1 319 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 ZNF286BP0CG31 522 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 FCARP24071 287 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 OAS2P29728 719 aaKnown RBP1.34□□□□□ -2.19
SRP54-207ENST00000555535 SERPINB6P35237 376 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 CCR6P51684 374 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 SCN1BQ07699 218 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 EIF2B1Q14232 305 aaKnown RBP1.34□□□□□ -2.19
SRP54-207ENST00000555535 CLPPQ16740 277 aaPredicted RBP1.34□□□□□ -2.19
SRP54-207ENST00000555535 SLC22A16Q86VW1 577 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 TUSC5Q8IXB3 177 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 THNSL1Q8IYQ7 743 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 CHCHD4Q8N4Q1 142 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 FAM71E2Q8N5Q1 922 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 RNF185Q96GF1 192 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 NMNAT2Q9BZQ4 307 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 NAPBQ9H115 298 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 PNO1Q9NRX1 252 aaKnown RBP1.34□□□□□ -2.19
SRP54-207ENST00000555535 PNPLA3Q9NST1 481 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 VPS54Q9P1Q0 977 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 ARMCX3Q9UH62 379 aaPredicted RBP1.34□□□□□ -2.19
SRP54-207ENST00000555535 SLCO1B1Q9Y6L6 691 aa1.34□□□□□ -2.19
SRP54-207ENST00000555535 H7C0S8 307 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 GMNNO75496 209 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 CABYRO75952 493 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 ANP32DO95626 131 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 LDHCP07864 332 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 IGLL1P15814 213 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 VDAC1P21796 283 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 NSFP46459 744 aaKnown RBP1.33□□□□□ -2.2
SRP54-207ENST00000555535 STARP49675 285 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 STK19P49842 368 aaPredicted RBP1.33□□□□□ -2.2
SRP54-207ENST00000555535 MNAT1P51948 309 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 BNIP1Q12981 228 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 SLAQ13239 276 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 PTK6Q13882 451 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 STXBP2Q15833 593 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 AANATQ16613 207 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 CYP51A1Q16850 503 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 LINC00483Q53H64 154 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 METTL11BQ5VVY1 283 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 KCTD11Q693B1 232 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 SHQ1Q6PI26 577 aaKnown RBP1.33□□□□□ -2.2
SRP54-207ENST00000555535 MSANTD1Q6ZTZ1 278 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 PARGQ86W56 976 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 C17orf82Q86X59 251 aaPredicted RBP1.33□□□□□ -2.2
SRP54-207ENST00000555535 ZNF695Q8IW36 515 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 OR2AP1Q8NGE2 309 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 OR2A12Q8NGT7 310 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 PSMG2Q969U7 264 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 RAB39BQ96DA2 213 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 TXN2Q99757 166 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 DDX50Q9BQ39 737 aaKnown RBP1.33□□□□□ -2.2
SRP54-207ENST00000555535 MLPHQ9BV36 600 aaPredicted RBP1.33□□□□□ -2.2
SRP54-207ENST00000555535 FUT8Q9BYC5 575 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 EHFQ9NZC4 300 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 MBD2Q9UBB5 411 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 TBX21Q9UL17 535 aa1.33□□□□□ -2.2
SRP54-207ENST00000555535 A0A0A6YYC8 382 aaPredicted RBP1.32□□□□□ -2.2
SRP54-207ENST00000555535 IGHV7-81A0A0B4J1V7 117 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 LRIT2A6NDA9 550 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 ZSCAN5BA6NJL1 495 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 I3L1I5 382 aaPredicted RBP1.32□□□□□ -2.2
SRP54-207ENST00000555535 NBR2O15453 112 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 DKC1O60832 514 aaKnown RBP eCLIP1.32□□□□□ -2.2
SRP54-207ENST00000555535 CRCPO75575 148 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 IGFBP3P17936 291 aaPredicted RBP1.32□□□□□ -2.2
SRP54-207ENST00000555535 BTDP43251 543 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 SGSHP51688 502 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 APOC4P55056 127 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 RPS6P62753 249 aaKnown RBP1.32□□□□□ -2.2
SRP54-207ENST00000555535 TSPY1Q01534 308 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 ROR1Q01973 937 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 RAB35Q15286 201 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 GPAT3Q53EU6 434 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 CCDC158Q5M9N0 1113 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 ZNF836Q6ZNA1 936 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 RNF165Q6ZSG1 346 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 OR8H2Q8N162 312 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 ZNF615Q8N8J6 731 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 ATAD1Q8NBU5 361 aa1.32□□□□□ -2.2
SRP54-207ENST00000555535 MCHR2Q969V1 340 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms