RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 CHMP1BQ7LBR1 199 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 OR4N4Q8N0Y3 316 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 C10orf111Q8N326 155 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 NANOGP1Q8N7R0 232 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 CDRT4Q8N9R6 151 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 OR5D16Q8NGK9 328 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 MYLIPQ8WY64 445 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 SIPA1Q96FS4 1042 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 GTPBP2Q9BX10 602 aaKnown RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 MMP28Q9H239 520 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 CLEC2DQ9UHP7 191 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 DOCK6Q96HP0 2047 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 HEATR5BQ9P2D3 2071 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 L7N2F9 121 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 KHDRBS3O75525 346 aaKnown RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 KAT7O95251 611 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 DBIP07108 87 aaKnown RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 CD22P20273 847 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 RAB3BP20337 219 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 AHRP35869 848 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 ZFP36L2P47974 494 aaKnown RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 ERVK-21P61565 698 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 CHRNEQ04844 493 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 FAPQ12884 760 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 ASAH1Q13510 395 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 ZNF776Q68DI1 518 aaPredicted RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 PLBD1Q6P4A8 553 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 TPRA1Q86W33 373 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 LRRC25Q8N386 305 aaPredicted RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 MRPL43Q8N983 215 aaKnown RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 FAM83FQ8NEG4 500 aaPredicted RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 TMEM163Q8TC26 289 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 S100A16Q96FQ6 103 aaKnown RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 NARS2Q96I59 477 aaKnown RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 ZNF717Q9BY31 904 aaPredicted RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 ANKRD19PQ9H560 264 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 HHATLQ9HCP6 504 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 Q9N2J8 555 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 TLR9Q9NR96 1032 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 ZNF224Q9NZL3 707 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 EIF3KQ9UBQ5 218 aaKnown RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 BAIAP2Q9UQB8 552 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 ARHGEF17Q96PE2 2063 aaPredicted RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 TEX13CA0A0J9YWL9 993 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 TMEM202A6NGA9 273 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 IGLON5A6NGN9 336 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 FAM227AF5H4B4 570 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 GAPDHSO14556 408 aaPredicted RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 HLA-DQA2P01906 255 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 ACVR2AP27037 513 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 TGFBR1P36897 503 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 GPR4P46093 362 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 RNF144AP50876 292 aaPredicted RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 FBXW4P57775 412 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 ZNF155Q12901 538 aaPredicted RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 BTBD16Q32M84 506 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 ZNF385BQ569K4 471 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 C2orf27AQ580R0 203 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 Q6ZNB5 142 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 SHFQ7M4L6 423 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 ZNF550Q7Z398 422 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 HMGN2P46Q86SG4 172 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 OR52N1Q8NH53 320 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 DEDD2Q8WXF8 326 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 CLIP3Q96DZ5 547 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 SAMD8Q96LT4 415 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 SORBS1Q9BX66 1292 aaKnown RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 SLC7A5P2Q9GIP4 190 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 HOXD1Q9GZZ0 328 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 PIGUQ9H490 435 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 RNF167Q9H6Y7 350 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 ISYNA1Q9NPH2 558 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 MED11Q9P086 117 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 PFDN2Q9UHV9 154 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 MRTO4Q9UKD2 239 aaKnown RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 TRAPPC4Q9Y296 219 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 MAB21L2Q9Y586 359 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 SCN3AQ9NY46 2000 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 FAM183AA6NL82 134 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 XKRYO14609 159 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 EEF1E1O43324 174 aaKnown RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 GPRIN2O60269 458 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 SLC43A1O75387 559 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 PTBP1P26599 531 aaKnown RBP eCLIP3.67□□□□□ -1.82
KTN1-217ENST00000554831 FGF9P31371 208 aaPredicted RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 SSTR4P31391 388 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 ACVR1BP36896 505 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 DDOSTP39656 456 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 SIM1P81133 766 aaPredicted RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 GBX1Q14549 363 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 PGGHGQ32M88 737 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 RNASE12Q5GAN4 147 aaKnown RBP3.67□□□□□ -1.82
KTN1-217ENST00000554831 SNAP47Q5SQN1 464 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 PRAMEF8Q5VWM4 474 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 PRAMEF7Q5VXH5 474 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 ACSM5Q6NUN0 579 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 TECPR1Q7Z6L1 1165 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 OR8H3Q8N146 312 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 YIPF7Q8N8F6 280 aa3.67□□□□□ -1.82
KTN1-217ENST00000554831 LMNTD1Q8N9Z9 388 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms