RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 REEP3Q6NUK4 255 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 TMEM53Q6P2H8 277 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 CD300LDQ6UXZ3 194 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 BTLAQ7Z6A9 289 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 CLECL1Q8IZS7 167 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 METTL4Q8N3J2 472 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 PARP16Q8N5Y8 322 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 IL22RA1Q8N6P7 574 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 TEX19Q8NA77 164 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 OR6C4Q8NGE1 309 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 HUS1BQ8NHY5 278 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 KLHL6Q8WZ60 621 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 OR5P2Q8WZ92 322 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 AGAP4Q96P64 663 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 KCNC2Q96PR1 638 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 MGLLQ99685 303 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 COQ7Q99807 217 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 APOOQ9BUR5 198 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 TRAF4Q9BUZ4 470 aaPredicted RBP10.43□□□□□ -0.74
SRP54-205ENST00000554803 SPATA5L1Q9BVQ7 753 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 TAPBPLQ9BX59 468 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 SGPP1Q9BX95 441 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 EBPLQ9BY08 206 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 NLNQ9BYT8 704 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 PRRG3Q9BZD7 231 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 PCBD2Q9H0N5 130 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 WDR26Q9H7D7 661 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 ZBTB20Q9HC78 741 aaPredicted RBP10.43□□□□□ -0.74
SRP54-205ENST00000554803 DMRT3Q9NQL9 472 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 ABCB10Q9NRK6 738 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 PNMA8BQ9ULN7 279 aaPredicted RBP10.43□□□□□ -0.74
SRP54-205ENST00000554803 TP53TG5Q9Y2B4 290 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 CSMD2Q7Z408 3487 aa10.43□□□□□ -0.74
SRP54-205ENST00000554803 SPG11Q96JI7 2443 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 WIPF3A6NGB9 483 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 CENPBD1B2RD01 187 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 E7EQ34 232 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 CAPN5O15484 640 aaPredicted RBP10.42□□□□□ -0.74
SRP54-205ENST00000554803 ZW10O43264 779 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 PRAMEF4O60810 478 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 IL1AP01583 271 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 DBTP11182 482 aaKnown RBP10.42□□□□□ -0.74
SRP54-205ENST00000554803 OSMP13725 252 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 ZNF8P17098 575 aaPredicted RBP10.42□□□□□ -0.74
SRP54-205ENST00000554803 CD22P20273 847 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 TEAD1P28347 426 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 PBLDP30039 288 aaPredicted RBP10.42□□□□□ -0.74
SRP54-205ENST00000554803 CHI3L1P36222 383 aaPredicted RBP10.42□□□□□ -0.74
SRP54-205ENST00000554803 IDH2P48735 452 aaKnown RBP10.42□□□□□ -0.74
SRP54-205ENST00000554803 RORCP51449 518 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 CDH12P55289 794 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 TPTEP56180 551 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 TMEM115Q12893 351 aaPredicted RBP10.42□□□□□ -0.74
SRP54-205ENST00000554803 PPP1R8Q12972 351 aaKnown RBP10.42□□□□□ -0.74
SRP54-205ENST00000554803 MLLT11Q13015 90 aaPredicted RBP10.42□□□□□ -0.74
SRP54-205ENST00000554803 SELENBP1Q13228 472 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 DNASE1L3Q13609 305 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 MLC1Q15049 377 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 ELOCQ15369 112 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 KCNJ8Q15842 424 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 EXOC3L2Q2M3D2 409 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.42□□□□□ -0.74
SRP54-205ENST00000554803 PRAMEF9Q5VWM5 478 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 FRMPD2BQ6IN97 320 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 PTCHD4Q6ZW05 846 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 SLITRK4Q8IW52 837 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 NAGSQ8N159 534 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 KRT78Q8N1N4 520 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 CLDN22Q8N7P3 220 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 PROKR2Q8NFJ6 384 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 OR8J1Q8NGP2 316 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 APOBEC4Q8WW27 367 aaKnown RBP10.42□□□□□ -0.74
SRP54-205ENST00000554803 AP3S1Q92572 193 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 PYCR2Q96C36 320 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 PDXPQ96GD0 296 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 TMEM80Q96HE8 168 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 LINC00615Q96LM1 132 aaPredicted RBP10.42□□□□□ -0.74
SRP54-205ENST00000554803 ZNF607Q96SK3 696 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 DPEP2Q9H4A9 486 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 NT5DC2Q9H857 520 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 TRIM39Q9HCM9 518 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 ACER3Q9NUN7 267 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 ZNF226Q9NYT6 803 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 SH3BP4Q9P0V3 963 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 PHF11Q9UIL8 331 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 ADAM29Q9UKF5 820 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.42□□□□□ -0.74
SRP54-205ENST00000554803 PRKAB1Q9Y478 270 aa10.42□□□□□ -0.74
SRP54-205ENST00000554803 TMEM202A6NGA9 273 aa10.41□□□□□ -0.74
SRP54-205ENST00000554803 TMEM229AB2RXF0 380 aa10.41□□□□□ -0.74
SRP54-205ENST00000554803 C5orf58C9J3I9 102 aa10.41□□□□□ -0.74
SRP54-205ENST00000554803 DSCR3O14972 297 aa10.41□□□□□ -0.74
SRP54-205ENST00000554803 NKX2-8O15522 239 aa10.41□□□□□ -0.74
SRP54-205ENST00000554803 TBX1O43435 398 aa10.41□□□□□ -0.74
SRP54-205ENST00000554803 DUX1O43812 170 aa10.41□□□□□ -0.74
SRP54-205ENST00000554803 RPN2P04844 631 aa10.41□□□□□ -0.74
SRP54-205ENST00000554803 CELA2BP08218 269 aaPredicted RBP10.41□□□□□ -0.74
SRP54-205ENST00000554803 GSTM3P21266 225 aa10.41□□□□□ -0.74
SRP54-205ENST00000554803 CFL1P23528 166 aaKnown RBP10.41□□□□□ -0.74
SRP54-205ENST00000554803 IMPA1P29218 277 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms