RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 WWTR1Q9GZV5 400 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 GSX1Q9H4S2 264 aaPredicted RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 WDR41Q9HAD4 459 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 SH2D2AQ9NP31 389 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 ACKR4Q9NPB9 350 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 PFDN4Q9NQP4 134 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 PAPOLBQ9NRJ5 636 aaKnown RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 NUDT4Q9NZJ9 180 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 FOXD3Q9UJU5 478 aaPredicted RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 PTBP2Q9UKA9 531 aaKnown RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 CBLCQ9ULV8 474 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 CAMK2AQ9UQM7 478 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 PCDHGB3Q9Y5G1 929 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 CHCHD2Q9Y6H1 151 aaPredicted RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 EML6Q6ZMW3 1958 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 C2orf92A0A1B0GVN3 265 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 K7EPI3 171 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 UBXN8O00124 270 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 SYT5O00445 386 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 PLPP1O14494 284 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 AIM2O14862 343 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 DLX3O60479 287 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 BCAS2O75934 225 aaPredicted RBP8.09□□□□□ -1.11
TDP1-208ENST00000553989 RAF1P04049 648 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 NR2F6P10588 404 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 EPB42P16452 691 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 HOXB4P17483 251 aaPredicted RBP8.09□□□□□ -1.11
TDP1-208ENST00000553989 EPORP19235 508 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 TMED10P49755 219 aaKnown RBP8.09□□□□□ -1.11
TDP1-208ENST00000553989 ATP4BP51164 291 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 AGFG1P52594 562 aaKnown RBP8.09□□□□□ -1.11
TDP1-208ENST00000553989 NRG3P56975 720 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 RPP38P78345 283 aaKnown RBP8.09□□□□□ -1.11
TDP1-208ENST00000553989 IGLV3-21P80748 117 aaPredicted RBP8.09□□□□□ -1.11
TDP1-208ENST00000553989 EBPQ15125 230 aaKnown RBP8.09□□□□□ -1.11
TDP1-208ENST00000553989 NTRK2Q16620 822 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 DEPDC1Q5TB30 811 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 GRHL2Q6ISB3 625 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 PAMR1Q6UXH9 720 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 HACD2Q6Y1H2 254 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 TMEM64Q6YI46 380 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 FRMD7Q6ZUT3 714 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 SEM1Q6ZVN7 128 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 CAMKMTQ7Z624 323 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 KIF18BQ86Y91 864 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 LAS2Q8IYD9 372 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 PQLC1Q8N2U9 271 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 RNF175Q8N4F7 328 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 POU5F2Q8N7G0 328 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 OR7G3Q8NG95 312 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 HUS1BQ8NHY5 278 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 REPS1Q96D71 796 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 MAELQ96JY0 434 aaKnown RBP8.09□□□□□ -1.11
TDP1-208ENST00000553989 GPR78Q96P69 363 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 YIPF3Q9GZM5 350 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 ACTR8Q9H981 624 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 LYARQ9NX58 379 aaKnown RBP8.09□□□□□ -1.11
TDP1-208ENST00000553989 TEX10Q9NXF1 929 aaPredicted RBP8.09□□□□□ -1.11
TDP1-208ENST00000553989 ADGRE2Q9UHX3 823 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 SLC6A5Q9Y345 797 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 DTNAQ9Y4J8 743 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 ABCA4P78363 2273 aa8.09□□□□□ -1.11
TDP1-208ENST00000553989 AKAP6Q13023 2319 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 OR6C76A6NM76 312 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 KDM4EB2RXH2 506 aaPredicted RBP8.08□□□□□ -1.12
TDP1-208ENST00000553989 E9PBE3 544 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 KERAO60938 352 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 SNX4O95219 450 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 WISP3O95389 354 aaPredicted RBP8.08□□□□□ -1.12
TDP1-208ENST00000553989 GPR75O95800 540 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 EPPINO95925 133 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 LTA4HP09960 611 aaKnown RBP8.08□□□□□ -1.12
TDP1-208ENST00000553989 PABPC4LP0CB38 370 aaKnown RBP8.08□□□□□ -1.12
TDP1-208ENST00000553989 SLC35E2BP0CK96 405 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 GFAPP14136 432 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 IMPDH1P20839 514 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 SSTR4P31391 388 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 TIMP3P35625 211 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 GMPRP36959 345 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 CASP2P42575 452 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 ZNF136P52737 540 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 CHN2P52757 468 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 SLC37A1P57057 533 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 FBXW4P57775 412 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 RPS13P62277 151 aaKnown RBP8.08□□□□□ -1.12
TDP1-208ENST00000553989 ADAM8P78325 824 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 CRYZQ08257 329 aaKnown RBP8.08□□□□□ -1.12
TDP1-208ENST00000553989 RCAN2Q14206 197 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 SQLEQ14534 574 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 POU4F3Q15319 338 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 PCBP2Q15366 365 aaKnown RBP eCLIP8.08□□□□□ -1.12
TDP1-208ENST00000553989 TRIP10Q15642 601 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 DEFB113Q30KQ7 82 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 LIN52Q52LA3 116 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 BICRALQ6AI39 1079 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 NXNQ6DKJ4 435 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 NUDT13Q86X67 352 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 SNX32Q86XE0 403 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 GALNT12Q8IXK2 581 aa8.08□□□□□ -1.12
TDP1-208ENST00000553989 PRR22Q8IZ63 422 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms