RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 MLIPQ5VWP3 458 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 TCTN3Q6NUS6 607 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 ZBTB49Q6ZSB9 765 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 ANKRD37Q7Z713 158 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 LAPTM4BQ86VI4 370 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 ZDHHC13Q8IUH4 622 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 EPHX4Q8IUS5 362 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 SHISA5Q8N114 240 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 ESX1Q8N693 406 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 COX18Q8N8Q8 333 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 PIK3C3Q8NEB9 887 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 FAM71CQ8NEG0 241 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 METTL21AQ8WXB1 218 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 EME1Q96AY2 570 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 PPWD1Q96BP3 646 aaKnown RBP10.09□□□□□ -0.79
PABPN1-203ENST00000553960 NTNG2Q96CW9 530 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 VPS50Q96JG6 964 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 LCORQ96JN0 433 aaPredicted RBP10.09□□□□□ -0.79
PABPN1-203ENST00000553960 SEPHS2Q99611 448 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 PIP5K1AQ99755 562 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 OSBPL11Q9BXB4 747 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 TMEM121BQ9BXQ6 578 aaPredicted RBP10.09□□□□□ -0.79
PABPN1-203ENST00000553960 SLC7A5P2Q9GIP4 190 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 ZNF700Q9H0M5 742 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 COPS7AQ9UBW8 275 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 PADI1Q9ULC6 663 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 LRCH1Q9Y2L9 728 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 KCNE3Q9Y6H6 103 aa10.09□□□□□ -0.79
PABPN1-203ENST00000553960 CDHR4A6H8M9 788 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 DLGAP1O14490 977 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 OXSR1O95747 527 aaPredicted RBP10.08□□□□□ -0.8
PABPN1-203ENST00000553960 ZNF682O95780 498 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 EPPINO95925 133 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 IGF2P01344 180 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 ALPPP05187 535 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 ATXN8OSP0DMR3 200 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 ATP6V1C1P21283 382 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 MMP11P24347 488 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 SSTR4P31391 388 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 ALDH3A2P51648 485 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 PNLIPRP2P54317 469 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 PRKAG1P54619 331 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 ATP12AP54707 1039 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 HPCAP84074 193 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 CHRNEQ04844 493 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 ERV3-1Q14264 604 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 EXT1Q16394 746 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 LIN52Q52LA3 116 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 NHSL2Q5HYW2 709 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 FAHD1Q6P587 224 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 CD300LDQ6UXZ3 194 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 NPSR1Q6W5P4 371 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 NUP54Q7Z3B4 507 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 CPEB2Q7Z5Q1 589 aaKnown RBP10.08□□□□□ -0.8
PABPN1-203ENST00000553960 VTCN1Q7Z7D3 282 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 ZNF440Q8IYI8 595 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 DND1Q8IYX4 353 aaKnown RBP10.08□□□□□ -0.8
PABPN1-203ENST00000553960 LSMEM1Q8N8F7 131 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 SIMC1Q8NDZ2 872 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 OR4C15Q8NGM1 316 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 ADAMTS14Q8WXS8 1223 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 CDS1Q92903 461 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 TSLPQ969D9 159 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 VMP1Q96GC9 406 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 IMMP1LQ96LU5 166 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 COL21A1Q96P44 957 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 IP6K3Q96PC2 410 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 LPAR4Q99677 370 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 RBM4BQ9BQ04 359 aaKnown RBP10.08□□□□□ -0.8
PABPN1-203ENST00000553960 RBM4Q9BWF3 364 aaKnown RBP10.08□□□□□ -0.8
PABPN1-203ENST00000553960 ULBP3Q9BZM4 244 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 EXOSC3Q9NQT5 275 aaKnown RBP10.08□□□□□ -0.8
PABPN1-203ENST00000553960 ACER3Q9NUN7 267 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 KLHL28Q9NXS3 571 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 C3orf18Q9UK00 162 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 OAZ3Q9UMX2 235 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 ERVK-19Q9WJR5 959 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 CHST2Q9Y4C5 530 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 DTNAQ9Y4J8 743 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 B3GALT1Q9Y5Z6 326 aa10.08□□□□□ -0.8
PABPN1-203ENST00000553960 A0A1W2PNU3 283 aaPredicted RBP10.07□□□□□ -0.8
PABPN1-203ENST00000553960 CDRT15L2A8MXV6 281 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 G3V2T6 193 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 SLC30A4O14863 429 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 FCMRO60667 390 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 UGT2B17O75795 530 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 STK17BO94768 372 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 IFNA16P05015 189 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 HEXBP07686 556 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 ICAM2P13598 275 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 ZNF28P17035 718 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 TBXA2RP21731 343 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 GABRA3P34903 492 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 ARHGDIAP52565 204 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 DLX5P56178 289 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 SSPNQ14714 243 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 EXOSC7Q15024 291 aaKnown RBP10.07□□□□□ -0.8
PABPN1-203ENST00000553960 DECR1Q16698 335 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 MINDY4Q4G0A6 757 aa10.07□□□□□ -0.8
PABPN1-203ENST00000553960 CRTC2Q53ET0 693 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms