RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ERVK-6Q9BXR3 956 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ROGDIQ9GZN7 287 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 FAM49AQ9H0Q0 323 aaPredicted RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 RHOJQ9H4E5 214 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 FAM124BQ9H5Z6 455 aaPredicted RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 VCPKMTQ9H867 229 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 NEK6Q9HC98 313 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 S100A14Q9HCY8 104 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 LZTFL1Q9NQ48 299 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 TECRQ9NZ01 308 aaKnown RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 GCNT4Q9P109 453 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 THEGQ9P2T0 379 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 MIOXQ9UGB7 285 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 IL36AQ9UHA7 158 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 KLK13Q9UKR3 277 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 FZR1Q9UM11 496 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 SATB2Q9UPW6 733 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 TRAF3IP3Q9Y228 551 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 PIGLQ9Y2B2 252 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ZNF175Q9Y473 711 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 WDR45Q9Y484 360 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 MAD1L1Q9Y6D9 718 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 PARD3Q8TEW0 1356 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 NINLQ9Y2I6 1382 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 LOC105371242A0A075B767 164 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 TRAV26-1A0A087WT03 109 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 A0A0J9YVX5 310 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 TRBV4-1A0A0J9YWV2 114 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 A0A0U1RQS6 177 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 LOC101059948A0A1B0GTJ6 334 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 A0A1W2PN81 502 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 RNF222A6NCQ9 220 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 FAM74A7A6NL05 159 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 KIF2AO00139 706 aaPredicted RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 CLDN5O00501 218 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 CASKO14936 926 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 EPHB6O15197 1021 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 ZNF264O43296 627 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 AKR7A2O43488 359 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 SPOPO43791 374 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 N4BP1O75113 896 aaKnown RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 SAP30O75446 220 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 LRATO95237 230 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 CLPTM1O96005 669 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 HPRP00739 348 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 CSTAP01040 98 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 DUX4L4P0CJ87 422 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 PRKAR1AP10644 381 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 CD59P13987 128 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 UQCRBP14927 111 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 LIFP15018 202 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 CYP2B6P20813 491 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 CA4P22748 312 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 CHMLP26374 656 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 LAP3P28838 519 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 HNRNPH3P31942 346 aaKnown RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 BMI1P35226 326 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 NF2P35240 595 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 RFC2P35250 354 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 DEKP35659 375 aaKnown RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 CHRNA7P36544 502 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 ID1P41134 155 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 EPS15P42566 896 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 BRCC3P46736 316 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 BCAP31P51572 246 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 PLA2G16P53816 162 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 B3GALT5-AS1P59052 145 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 PPIAP62937 165 aaKnown RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 ACY1Q03154 408 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 GPR50Q13585 617 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 CUL1Q13616 776 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 KLF5Q13887 457 aaPredicted RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 HNRNPDQ14103 355 aaKnown RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 ELAVL3Q14576 367 aaKnown RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 TAF13Q15543 124 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 OR1C1Q15619 314 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 CHI3L2Q15782 390 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 STK11Q15831 433 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 C3AR1Q16581 482 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 ALKBH6Q3KRA9 238 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 DCAF4L1Q3SXM0 396 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 FAM74A3Q4VXF1 159 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 XKR3Q5GH77 459 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 SLC25A53Q5H9E4 307 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 PDZK1Q5T2W1 519 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 PIP5KL1Q5T9C9 394 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 LCN1P1Q5VSP4 162 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 AGAP7PQ5VUJ5 663 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 LRRC66Q68CR7 880 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 TCEAL6Q6IPX3 200 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 STEAP1BQ6NZ63 245 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 SCYL2Q6P3W7 929 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 RNASEKQ6P5S7 137 aaKnown RBP1.95□□□□□ -2.1
SRP54-204ENST00000553923 TRIM65Q6PJ69 517 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 UQCC3Q6UW78 93 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 LINGO4Q6UY18 593 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 ZNF730Q6ZMV8 503 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 DPY19L2P2Q6ZN68 376 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 Q6ZRG5 221 aa1.95□□□□□ -2.1
SRP54-204ENST00000553923 CYP4V2Q6ZWL3 525 aaPredicted RBP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms