RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 CTHRC1Q96CG8 243 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 DUS3LQ96G46 650 aaKnown RBP13.42□□□□□ -0.26
SHMT2-208ENST00000553868 VN1R1Q9GZP7 353 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 RNPEPL1Q9HAU8 725 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 S100A14Q9HCY8 104 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 CALML5Q9NZT1 146 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 SAMD4AQ9UPU9 718 aaKnown RBP13.42□□□□□ -0.26
SHMT2-208ENST00000553868 LIPT1Q9Y234 373 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 PCDHGA9Q9Y5G4 932 aaKnown RBP13.42□□□□□ -0.26
SHMT2-208ENST00000553868 MYOCOSA0A1B0GUC4 107 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 DHRS12A0PJE2 317 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 VSTM2BA6NLU5 285 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 TGFBR3LH3BV60 316 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 PCDH17O14917 1159 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 PRAMEF2O60811 474 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 ALOX5P09917 674 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 NUDT7P0C024 238 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 CCNYL3P0C7X3 344 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 SLC7A1P30825 629 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 KDELR2P33947 212 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 EMP2P54851 167 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 CASP9P55211 416 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 RPS26P62854 115 aaKnown RBP13.41□□□□□ -0.26
SHMT2-208ENST00000553868 MRPS22P82650 360 aaKnown RBP13.41□□□□□ -0.26
SHMT2-208ENST00000553868 MGAT2Q10469 447 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 ZNF267Q14586 743 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-208ENST00000553868 ZNHIT3Q15649 155 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-208ENST00000553868 NKG7Q16617 165 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 TRMT12Q53H54 448 aaKnown RBP13.41□□□□□ -0.26
SHMT2-208ENST00000553868 IRAK1BP1Q5VVH5 260 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 MLIPQ5VWP3 458 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 REEP3Q6NUK4 255 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 PATL1Q86TB9 770 aaKnown RBP13.41□□□□□ -0.26
SHMT2-208ENST00000553868 TMEM151BQ8IW70 566 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 PRSS58Q8IYP2 241 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 SHISA5Q8N114 240 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 OR14A16Q8NHC5 309 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 NFKBIDQ8NI38 313 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 XAGE5Q8WWM1 108 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 CNPPD1Q9BV87 410 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 UGT2B28Q9BY64 529 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 RUBCNLQ9H714 662 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 EQTNQ9NQ60 294 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 PNO1Q9NRX1 252 aaKnown RBP13.41□□□□□ -0.26
SHMT2-208ENST00000553868 OLAHQ9NV23 265 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 ADPRHL2Q9NX46 363 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 GIN1Q9NXP7 522 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 PRODH2Q9UF12 536 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 C19orf25Q9UFG5 118 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-208ENST00000553868 ZNF639Q9UID6 485 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 CFL2Q9Y281 166 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 CLDN16Q9Y5I7 305 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 CLCA3PQ9Y6N3 262 aa13.41□□□□□ -0.26
SHMT2-208ENST00000553868 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 C17orf105B2RV13 164 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 IDSB3KWA1 339 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 HMGN4O00479 90 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 KRT36O76013 467 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 AK1P00568 194 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 C1QCP02747 245 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 OR12D1P0DN82 309 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 NR2F1P10589 423 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 ERFP50548 548 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 CRISP3P54108 245 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 KRTAP10-9P60411 292 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 RPS18P62269 152 aaKnown RBP13.4□□□□□ -0.26
SHMT2-208ENST00000553868 HPCAP84074 193 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 EEF1A2Q05639 463 aaKnown RBP13.4□□□□□ -0.26
SHMT2-208ENST00000553868 FUT7Q11130 342 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 ZNF155Q12901 538 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-208ENST00000553868 DNASE1L3Q13609 305 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 RCN1Q15293 331 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 SNCBQ16143 134 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 PLEKHN1Q494U1 663 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-208ENST00000553868 FAM98BQ52LJ0 330 aaKnown RBP13.4□□□□□ -0.26
SHMT2-208ENST00000553868 LRRC23Q53EV4 343 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-208ENST00000553868 PRAMEF8Q5VWM4 474 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 PRAMEF7Q5VXH5 474 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 FBXW10Q5XX13 1052 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 ZNF517Q6ZMY9 492 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-208ENST00000553868 CCDC80Q76M96 950 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 C16orf62Q7Z3J2 963 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 KRT73Q86Y46 540 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 ENDOVQ8N8Q3 282 aaKnown RBP13.4□□□□□ -0.26
SHMT2-208ENST00000553868 OR52R1Q8NGF1 315 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 BBS10Q8TAM1 723 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 RAB8BQ92930 207 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 TSLPQ969D9 159 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 PNPLA2Q96AD5 504 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 GIMAP5Q96F15 307 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 FBXL20Q96IG2 436 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 OR7D2Q96RA2 312 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 ZNF607Q96SK3 696 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 STACQ99469 402 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 CRB3Q9BUF7 120 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 ING2Q9H160 280 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 YY1AP1Q9H869 796 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 DCAF13Q9NV06 445 aaKnown RBP13.4□□□□□ -0.26
SHMT2-208ENST00000553868 PADI2Q9Y2J8 665 aa13.4□□□□□ -0.26
SHMT2-208ENST00000553868 TCRBV5S2A0A599 114 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms