RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ELAVL4P26378 380 aaKnown RBP16.54■□□□□ 0.24
SHMT2-206ENST00000553529 GABRA3P34903 492 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 EVI2BP34910 448 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 GFRA1P56159 465 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 B3GALT5-AS1P59052 145 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 RPP38P78345 283 aaKnown RBP16.54■□□□□ 0.24
SHMT2-206ENST00000553529 NHSL2Q5HYW2 709 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 CCNJQ5T5M9 372 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 RIPPLY2Q5TAB7 128 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 IKBIPQ70UQ0 350 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 DMRTC2Q8IXT2 367 aaPredicted RBP16.54■□□□□ 0.24
SHMT2-206ENST00000553529 CLYBLQ8N0X4 340 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 TMCO6Q96DC7 493 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 ERP27Q96DN0 273 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 RMND5BQ96G75 393 aaPredicted RBP16.54■□□□□ 0.24
SHMT2-206ENST00000553529 LMF2Q9BU23 707 aaKnown RBP16.54■□□□□ 0.24
SHMT2-206ENST00000553529 DSN1Q9H410 356 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 TAS2R10Q9NYW0 307 aa16.54■□□□□ 0.24
SHMT2-206ENST00000553529 H3BQF6 201 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 FADS1O60427 444 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 COQ9O75208 318 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 EPPINO95925 133 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 FGF4P08620 206 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 LAMP1P11279 417 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 GABRA1P14867 456 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 GPC1P35052 558 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 GSTM5P46439 218 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 SERPINB4P48594 390 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 LHX2P50458 406 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 PNLIPRP2P54317 469 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 NAA20P61599 178 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 GRAMD1BQ3KR37 738 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 FIGNL1Q6PIW4 674 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 SAMD14Q8IZD0 417 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-206ENST00000553529 CLEC4FQ8N1N0 589 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 MREGQ8N565 214 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 ZNF781Q8N8C0 355 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 GATSQ8NAP1 163 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 ZIM3Q96PE6 472 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 TRMOQ9BU70 441 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 ROPN1BQ9BZX4 212 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-206ENST00000553529 CENPHQ9H3R5 247 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 ROPN1Q9HAT0 212 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-206ENST00000553529 DKKL1Q9UK85 242 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 L3MBTL1Q9Y468 752 aa16.53■□□□□ 0.24
SHMT2-206ENST00000553529 AKAP9Q99996 3911 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 CBR3O75828 277 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 HOXD4P09016 255 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-206ENST00000553529 CEACAM8P31997 349 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-206ENST00000553529 KRT20P35900 424 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 FRKP42685 505 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-206ENST00000553529 CLDN15P56746 228 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 CLDN18P56856 261 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 SNTA1Q13424 505 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 CHI3L2Q15782 390 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 PDCD2Q16342 344 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-206ENST00000553529 DUSP5Q16690 384 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 RNF165Q6ZSG1 346 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 OLIG3Q7RTU3 272 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 GCNT2Q8N0V5 402 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 SLC16A11Q8NCK7 471 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 OR2M3Q8NG83 312 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 SH3GL2Q99962 352 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 TMEM109Q9BVC6 243 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 STMN4Q9H169 189 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-206ENST00000553529 PPP4R1LQ9P1A2 415 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 KCNE3Q9Y6H6 103 aa16.52■□□□□ 0.24
SHMT2-206ENST00000553529 DOCK7Q96N67 2140 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 NPIPA5A0A0B4J1W7 369 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 CLCA1A8K7I4 914 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 AHRRA9YTQ3 701 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 NPIPA7E9PJI5 369 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 H0Y3Z8 333 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 SCAMP2O15127 329 aaKnown RBP16.51■□□□□ 0.23
SHMT2-206ENST00000553529 ABCB7O75027 752 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 UTS2O95399 124 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 IL33O95760 270 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 C1QCP02747 245 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 NPIPA8P0DM63 369 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 NEFHP12036 1026 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 DPP4P27487 766 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 UQCRC1P31930 480 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 MAP3K8P41279 467 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 MRPS22P82650 360 aaKnown RBP16.51■□□□□ 0.23
SHMT2-206ENST00000553529 EFR3AQ14156 821 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 C6orf136Q5SQH8 315 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 CEP85LQ5SZL2 805 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 IL23RQ5VWK5 629 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 NSUN5P2Q63ZY6 315 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 IFNEQ86WN2 208 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 ZZZ3Q8IYH5 903 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 UBQLNLQ8IYU4 475 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 FADS6Q8N9I5 356 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 NUP43Q8NFH3 380 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 GPR151Q8TDV0 419 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 SLC9A6Q92581 669 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 ARSGQ96EG1 525 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 SFXN2Q96NB2 322 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 RAB21Q9UL25 225 aa16.51■□□□□ 0.23
SHMT2-206ENST00000553529 TGM6O95932 706 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms