RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 MAPRE3Q9UPY8 281 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 DLGAP4Q9Y2H0 992 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 TEX264Q9Y6I9 313 aa6.56□□□□□ -1.36
ATXN3-219ENST00000553488 MEGF8Q7Z7M0 2845 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 A0A087X1B8 175 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-219ENST00000553488 GLOD5A6NK44 160 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 CCNT2O60583 730 aaKnown RBP6.55□□□□□ -1.36
ATXN3-219ENST00000553488 TMCC2O75069 709 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 ICOSLGO75144 302 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 UGT2B11O75310 529 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 PCNAP12004 261 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 NAGAP17050 411 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 S1PR1P21453 382 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 IVDP26440 423 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 CNTFP26441 200 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 SRD5A2P31213 254 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 TLX1P31314 330 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-219ENST00000553488 GCKP35557 465 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 BSGP35613 385 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 BUD31P41223 144 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-219ENST00000553488 ARFIP1P53367 373 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 CLDN15P56746 228 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 NRG3P56975 720 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 RPS13P62277 151 aaKnown RBP6.55□□□□□ -1.36
ATXN3-219ENST00000553488 RPP38P78345 283 aaKnown RBP6.55□□□□□ -1.36
ATXN3-219ENST00000553488 SRSF3P84103 164 aaKnown RBP6.55□□□□□ -1.36
ATXN3-219ENST00000553488 SNTA1Q13424 505 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 NNATQ16517 81 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 HIST2H2ACQ16777 129 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-219ENST00000553488 KBTBD12Q3ZCT8 623 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 HIST2H2AA3Q6FI13 130 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 OR52E8Q6IFG1 317 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 GRHL2Q6ISB3 625 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 SLC30A6Q6NXT4 461 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 MED27Q6P2C8 311 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 PODNL1Q6PEZ8 512 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 SCIMPQ6UWF3 145 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 ZNF704Q6ZNC4 412 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-219ENST00000553488 PLEKHM3Q6ZWE6 761 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 JAZF1Q86VZ6 243 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 IFNEQ86WN2 208 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 GPSM1Q86YR5 675 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 HIPK1Q86Z02 1210 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 TRIM58Q8NG06 486 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 OR14L1PQ8NHC6 308 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 HUS1BQ8NHY5 278 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 UBTD2Q8WUN7 234 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 RNF138Q8WVD3 245 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 TMEM171Q8WVE6 324 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 TMEM158Q8WZ71 300 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 UBE2E3Q969T4 207 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 RGMAQ96B86 450 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 FAM111AQ96PZ2 611 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 TMEM204Q9BSN7 226 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 ITPAQ9BY32 194 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 RHOJQ9H4E5 214 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 DDX31Q9H8H2 851 aaKnown RBP6.55□□□□□ -1.36
ATXN3-219ENST00000553488 METTL7AQ9H8H3 244 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 ACTR8Q9H981 624 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 LZTFL1Q9NQ48 299 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 LYARQ9NX58 379 aaKnown RBP6.55□□□□□ -1.36
ATXN3-219ENST00000553488 FBXL2Q9UKC9 423 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 EXO1Q9UQ84 846 aaKnown RBP6.55□□□□□ -1.36
ATXN3-219ENST00000553488 TSC22D4Q9Y3Q8 395 aa6.55□□□□□ -1.36
ATXN3-219ENST00000553488 PRAMEF25A6NGN4 478 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 C16orf97H3BN30 126 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 PGRMC1O00264 195 aaKnown RBP6.54□□□□□ -1.36
ATXN3-219ENST00000553488 PGRMC2O15173 223 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 TP73O15350 636 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 PHGDHO43175 533 aaKnown RBP6.54□□□□□ -1.36
ATXN3-219ENST00000553488 PHF1O43189 567 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-219ENST00000553488 KLF4O43474 513 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 TLX2O43763 284 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-219ENST00000553488 CD5LO43866 347 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 CBR3O75828 277 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 PLAUP00749 431 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 FAM58BPP0C7Q3 252 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 POU2F1P14859 743 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 PIK3CBP42338 1070 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 RAP1GDS1P52306 607 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 ATP5J2P56134 94 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 B3GALT5-AS1P59052 145 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 MGAT5Q09328 741 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 MGAT2Q10469 447 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 DDX39BQ13838 428 aaKnown RBP6.54□□□□□ -1.36
ATXN3-219ENST00000553488 FASTKD3Q14CZ7 662 aaKnown RBP6.54□□□□□ -1.36
ATXN3-219ENST00000553488 ZKSCAN8Q15776 578 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-219ENST00000553488 FBLN7Q53RD9 439 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 BEX5Q5H9J7 111 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 OR2A2Q6IF42 318 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 DNM1P46Q6ZS02 220 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 ZNF611Q8N823 705 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 CNEP1R1Q8N9A8 125 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 OR7G1Q8NGA0 311 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 RDH11Q8TC12 318 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 GRK7Q8WTQ7 553 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 FIG4Q92562 907 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 OMA1Q96E52 524 aa6.54□□□□□ -1.36
ATXN3-219ENST00000553488 PGM2Q96G03 612 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms