RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 PPICP45877 212 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 GPR143P51810 404 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 TARDBPQ13148 414 aaKnown RBP eCLIP16.29■□□□□ 0.2
PSEN1-206ENST00000553447 EBPQ15125 230 aaKnown RBP16.29■□□□□ 0.2
PSEN1-206ENST00000553447 GPR68Q15743 365 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 NNATQ16517 81 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 PAPD4Q6PIY7 484 aaKnown RBP16.29■□□□□ 0.2
PSEN1-206ENST00000553447 DHRS4L2Q6PKH6 230 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 TIPARPQ7Z3E1 657 aaKnown RBP16.29■□□□□ 0.2
PSEN1-206ENST00000553447 CARM1Q86X55 608 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 VRK2Q86Y07 508 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 C9orf40Q8IXQ3 194 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 PEX5LQ8IYB4 626 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 ZSCAN1Q8NBB4 408 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 B3GNT7Q8NFL0 401 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 OR52P1PQ8NH57 321 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 ZNF300Q96RE9 604 aaPredicted RBP16.29■□□□□ 0.2
PSEN1-206ENST00000553447 WDR77Q9BQA1 342 aaPredicted RBP16.29■□□□□ 0.2
PSEN1-206ENST00000553447 MESP1Q9BRJ9 268 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 AMBRA1Q9C0C7 1298 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 FOXJ2Q9P0K8 574 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 CNOT11Q9UKZ1 510 aaKnown RBP16.29■□□□□ 0.2
PSEN1-206ENST00000553447 CBLCQ9ULV8 474 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 PPIEQ9UNP9 301 aaKnown RBP16.29■□□□□ 0.2
PSEN1-206ENST00000553447 IFT52Q9Y366 437 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 OR10H1Q9Y4A9 318 aa16.29■□□□□ 0.2
PSEN1-206ENST00000553447 MUC6Q6W4X9 2439 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 LOC102723996A0A087X1L8 192 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 FRG2CA6NGY1 282 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 AGAP5A6NIR3 686 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 SYT5O00445 386 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 ACOX3O15254 700 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 DPM1O60762 260 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 KLF7O75840 302 aaPredicted RBP16.28■□□□□ 0.2
PSEN1-206ENST00000553447 EPPINO95925 133 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 LGI1O95970 557 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 IGKV1D-16P01601 117 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 IFNW1P05000 195 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 DBIP07108 87 aaKnown RBP16.28■□□□□ 0.2
PSEN1-206ENST00000553447 UMODP07911 640 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 THBS1P07996 1170 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 ZNF23P17027 643 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 ZNF26P17031 533 aaPredicted RBP16.28■□□□□ 0.2
PSEN1-206ENST00000553447 DRD5P21918 477 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 DCAF7P61962 342 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 ZBTB49Q6ZSB9 765 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 SLC29A4Q7RTT9 530 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 ZAR1Q86SH2 424 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 COMTD1Q86VU5 262 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 TMPRSS12Q86WS5 348 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 BCORP1Q8N888 145 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 OR2Y1Q8NGV0 311 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 DNAJC9Q8WXX5 260 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 ADIPOR1Q96A54 375 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 LCORQ96JN0 433 aaPredicted RBP16.28■□□□□ 0.2
PSEN1-206ENST00000553447 ZNF347Q96SE7 839 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 ZNF184Q99676 751 aaPredicted RBP16.28■□□□□ 0.2
PSEN1-206ENST00000553447 LPAR4Q99677 370 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 G6PC3Q9BUM1 346 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 SEMA4CQ9C0C4 833 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 VCXQ9H320 206 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 VNN3Q9NY84 501 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 ZNF232Q9UNY5 417 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 ZNF443Q9Y2A4 671 aaPredicted RBP16.28■□□□□ 0.2
PSEN1-206ENST00000553447 AK5Q9Y6K8 562 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 ENPP4Q9Y6X5 453 aa16.28■□□□□ 0.2
PSEN1-206ENST00000553447 NPIPA5A0A0B4J1W7 369 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 C2orf92A0A1B0GVN3 265 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 NPIPA7E9PJI5 369 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 PDLIM1O00151 329 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 SOCS2O14508 198 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 DNAJB5O75953 348 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 TNFSF15O95150 251 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 RAB40ALP0C0E4 278 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 NPIPA8P0DM63 369 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 CEACAM1P13688 526 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 ATP6V1C1P21283 382 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 FOLR3P41439 243 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 RFX3P48380 749 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 IST1P53990 364 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 AQP4P55087 323 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 LARS2Q15031 903 aaKnown RBP16.27■□□□□ 0.2
PSEN1-206ENST00000553447 FLYWCH1Q4VC44 716 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 FAM69BQ5VUD6 431 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 HLA-DQA1Q5Y7H0 255 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 PPP4R4Q6NUP7 873 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 SVOPLQ8N434 492 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 GALNT4Q8N4A0 578 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 CBR4Q8N4T8 237 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 PACRGLQ8N7B6 248 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 OR4D11Q8NGI4 311 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 OR5K1Q8NHB7 308 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 VANGL1Q8TAA9 524 aaPredicted RBP16.27■□□□□ 0.2
PSEN1-206ENST00000553447 CT55Q8WUE5 264 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 C8orf44Q96CB5 159 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 GAL3ST4Q96RP7 486 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 SLC29A1Q99808 456 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 ARHGDIGQ99819 225 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 B3GNT4Q9C0J1 378 aa16.27■□□□□ 0.2
PSEN1-206ENST00000553447 WWTR1Q9GZV5 400 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms