RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 DDX43Q9NXZ2 648 aaKnown RBP4.46□□□□□ -1.7
ATXN3-218ENST00000553309 NKIRAS2Q9NYR9 191 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 STMN3Q9NZ72 180 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 GIMAP2Q9UG22 337 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.46□□□□□ -1.7
ATXN3-218ENST00000553309 NCKAP1Q9Y2A7 1128 aa4.46□□□□□ -1.7
ATXN3-218ENST00000553309 SCN8AQ9UQD0 1980 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 IGLV5-45A0A087WSX0 123 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 KLF18A0A0U1RQI7 1052 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 ARHGEF35A5YM69 484 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 OR6C74A6NCV1 312 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 C5orf60A6NFR6 353 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 D6RAR5 112 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 F8VP50 259 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 MKRN2OSH3BPM6 223 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 PIRO00625 290 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 NTN3O00634 580 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-218ENST00000553309 SCAMP1O15126 338 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 RIPK2O43353 540 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 SYNGR3O43761 229 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 ZG16O60844 167 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 SLC25A12O75746 678 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 ATP5HO75947 161 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 TBX18O95935 607 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 PABPC4LP0CB38 370 aaKnown RBP4.45□□□□□ -1.7
ATXN3-218ENST00000553309 FGF5P12034 268 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 PAX1P15863 534 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 GAP43P17677 238 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 ALOX12P18054 663 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 CAPN3P20807 821 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 HOXD13P35453 343 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 HADHAP40939 763 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 PRCPP42785 496 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 MAGEA11P43364 429 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 LEPRP48357 1165 aaKnown RBP4.45□□□□□ -1.7
ATXN3-218ENST00000553309 PSMD8P48556 350 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 POU3F4P49335 361 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 PEX3P56589 373 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 STX17P56962 302 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 GNG2P59768 71 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 UBE2HP62256 183 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 EIF3IQ13347 325 aaKnown RBP4.45□□□□□ -1.7
ATXN3-218ENST00000553309 DOC2AQ14183 400 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 KRT32Q14532 448 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 PPA1Q15181 289 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 NPTX1Q15818 432 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 CCDC58Q4VC31 144 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 C14orf28Q4W4Y0 310 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 LIN52Q52LA3 116 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 TTMPQ5BVD1 217 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 CCNYL2Q5T2Q4 361 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 LRRC8BQ6P9F7 803 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 MOXD1Q6UVY6 613 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 ZYG11AQ6WRX3 759 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 GPR141Q7Z602 305 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 UNC45BQ8IWX7 931 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 LINC00518Q8N0U6 118 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 FBXL16Q8N461 479 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 CSGALNACT2Q8N6G5 542 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 TMEM116Q8NCL8 245 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 LPCAT1Q8NF37 534 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 SLC2A14Q8TDB8 520 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 PYROXD1Q8WU10 500 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 RNF139Q8WU17 664 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 NELFBQ8WX92 580 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 NDRG1Q92597 394 aaKnown RBP4.45□□□□□ -1.7
ATXN3-218ENST00000553309 KLK6Q92876 244 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 FBXO32Q969P5 355 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 ST6GAL2Q96JF0 529 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 C7orf34Q96L11 122 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 CCT8L2Q96SF2 557 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 OMDQ99983 421 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 LLPHQ9BRT6 129 aaKnown RBP4.45□□□□□ -1.7
ATXN3-218ENST00000553309 GHITMQ9H3K2 345 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 C10orf88Q9H8K7 445 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 PLGRKTQ9HBL7 147 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 ETNK2Q9NVF9 386 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 INTS10Q9NVR2 710 aaKnown RBP4.45□□□□□ -1.7
ATXN3-218ENST00000553309 NFKBIL1Q9UBC1 381 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-218ENST00000553309 COPG2Q9UBF2 871 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 FETUBQ9UGM5 382 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 CHORDC1Q9UHD1 332 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-218ENST00000553309 RPL26L1Q9UNX3 145 aaKnown RBP4.45□□□□□ -1.7
ATXN3-218ENST00000553309 ERVK-19Q9WJR5 959 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 MYH10P35580 1976 aa4.45□□□□□ -1.7
ATXN3-218ENST00000553309 TNRC6AQ8NDV7 1962 aaKnown RBP4.45□□□□□ -1.7
ATXN3-218ENST00000553309 TCHHQ07283 1943 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 FUOMA2VDF0 154 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 OR5K3A6NET4 321 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 NEMP2A6NFY4 417 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 TRPC5OSA6NMA1 111 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 KPNA7A9QM74 516 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 SLCO1B7G3V0H7 640 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 TRIM77I1YAP6 450 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 EIF3DO15371 548 aaKnown RBP eCLIP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 SLC16A4O15374 487 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 SSX5O60225 188 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 SORBS2O94875 1100 aaKnown RBP4.44□□□□□ -1.7
ATXN3-218ENST00000553309 CCNDBP1O95273 360 aa4.44□□□□□ -1.7
ATXN3-218ENST00000553309 MLYCDO95822 493 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms