RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 SMIM24O75264 130 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 OTCP00480 354 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 PDYNP01213 254 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 RBP1P09455 135 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 SUCLG1P53597 346 aaKnown RBP12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 PLTPP55058 493 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 CLDN15P56746 228 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 UAP1Q16222 522 aaPredicted RBP12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 SGCBQ16585 318 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 TECRLQ5HYJ1 363 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 NPSR1Q6W5P4 371 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 SLC44A2Q8IWA5 706 aaPredicted RBP12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 C1orf52Q8N6N3 182 aaKnown RBP12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 ZNF611Q8N823 705 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 OR2M3Q8NG83 312 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 OR4F6Q8NGB9 312 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 OR9A2Q8NGT5 310 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 KAT2AQ92830 837 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 MRRFQ96E11 262 aaKnown RBP12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 VPS11Q9H270 941 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 FOLH1BQ9HBA9 442 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 FARSBQ9NSD9 589 aaKnown RBP12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 TAS2R9Q9NYW1 312 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 STOML1Q9UBI4 398 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 ABCG2Q9UNQ0 655 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 OR2M5A3KFT3 312 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 RNF212BA8MTL3 300 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 B4DXG7 233 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 H0YC42 278 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 HS3ST1O14792 307 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 KLF4O43474 513 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 PLGP00747 810 aaPredicted RBP12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 IFNA2P01563 188 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 TP53P04637 393 aaPredicted RBP12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 THBDP07204 575 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 NID1P14543 1247 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 CLK3P49761 638 aaKnown RBP12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 TPD52P55327 224 aaPredicted RBP12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 TNK1Q13470 666 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 GUSBP1Q15486 140 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 ETFDHQ16134 617 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 HEPHL1Q6MZM0 1159 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 PPP4R4Q6NUP7 873 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 C22orf34Q6ZV56 151 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 METTL25Q8N6Q8 603 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 OR6K3Q8NGY3 331 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 MTBPQ96DY7 904 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 NSUN5Q96P11 429 aaKnown RBP12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 PRRG4Q9BZD6 226 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 ANKRA2Q9H9E1 313 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 ZBTB26Q9HCK0 441 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 MED11Q9P086 117 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 VPS29Q9UBQ0 182 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 UTP11Q9Y3A2 253 aaKnown RBP12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 AP4B1Q9Y6B7 739 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 CUBNO60494 3623 aa12.75□□□□□ -0.37
CHMP1A-210ENST00000551981 HMX2A2RU54 273 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 C17orf51A8MQB3 221 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 RAD51CO43502 376 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 PLOD3O60568 738 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 CTBP2P56545 445 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 CLDN20P56880 219 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 RPS4XP62701 263 aaKnown RBP12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 ZNF155Q12901 538 aaPredicted RBP12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 STX5Q13190 355 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 VEZF1Q14119 521 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 CLEC12BQ2HXU8 276 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 GLYR1Q49A26 553 aaPredicted RBP12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 HMBOX1Q6NT76 420 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 PODNL1Q6PEZ8 512 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 WFDC8Q8IUA0 241 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 FAM9CQ8IZT9 166 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 OR4N2Q8NGD1 307 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 OR5M1Q8NGP8 315 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 UHMK1Q8TAS1 419 aaKnown RBP12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 FBXO25Q8TCJ0 367 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 EXOSC8Q96B26 276 aaKnown RBP12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 PLPPR2Q96GM1 343 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 PLSCR4Q9NRQ2 329 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 MCM8Q9UJA3 840 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 NFU1Q9UMS0 254 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 LAMP3Q9UQV4 416 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 NBEAL1Q6ZS30 2694 aa12.74□□□□□ -0.37
CHMP1A-210ENST00000551981 GNG14A0A1W2PPG7 69 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 RNF223E7ERA6 249 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 FADS1O60427 444 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 COQ9O75208 318 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 NME6O75414 186 aaPredicted RBP12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 AQP8O94778 261 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 SOX30O94993 753 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 IL3P08700 152 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 RPS17P08708 135 aaKnown RBP12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 HSD3B1P14060 373 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 HSD3B2P26439 372 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 MPIP34949 423 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 KRTAP1-1Q07627 177 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 CAPRIN1Q14444 709 aaKnown RBP12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 HEPACAMQ14CZ8 416 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 DECR1Q16698 335 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 TSNAXIP1Q2TAA8 658 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms