RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 OTUB1Q96FW1 271 aaPredicted RBP6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 ART5Q96L15 291 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 SFXN2Q96NB2 322 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 KCNA7Q96RP8 456 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 OSBPL11Q9BXB4 747 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 EBPLQ9BY08 206 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 WNT10AQ9GZT5 417 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 DSN1Q9H410 356 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 PFDN4Q9NQP4 134 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 LYARQ9NX58 379 aaKnown RBP6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 NSMCE4AQ9NXX6 385 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 MED11Q9P086 117 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 CLCF1Q9UBD9 225 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 ZNF225Q9UK10 706 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 PCDHA9Q9Y5H5 950 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 ALPK2Q86TB3 2170 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 OR6C76A6NM76 312 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 A8MXE2 369 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 H0YIV9 168 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 SMPD2O60906 423 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 OR4F21O95013 312 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 KLHL2O95198 593 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 SNX4O95219 450 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 CLDN9O95484 217 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 ESRRBO95718 433 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 IL3P08700 152 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 SBK3P0C264 359 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 ATF4P18848 351 aaPredicted RBP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 EFNA1P20827 205 aaPredicted RBP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 CRABP2P29373 138 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 HPDP32754 393 aaPredicted RBP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 OPRM1P35372 400 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 DEKP35659 375 aaKnown RBP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 KIR2DL2P43627 348 aaPredicted RBP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 SLC6A8P48029 635 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 KCNJ5P48544 419 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 MAPK12P53778 367 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 ALDH18A1P54886 795 aaKnown RBP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 GFRA1P56159 465 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 NRG3P56975 720 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 RAE1P78406 368 aaKnown RBP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 SRSF2Q01130 221 aaKnown RBP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 HMGCS1Q01581 520 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 CLCQ05315 142 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 TBL3Q12788 808 aaKnown RBP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 CUL3Q13618 768 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 RCAN2Q14206 197 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 CDKL4Q5MAI5 379 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 C10orf62Q5T681 223 aaPredicted RBP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 LGSNQ5TDP6 509 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 LIPJQ5W064 366 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 FRG2Q64ET8 278 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 SLC48A1Q6P1K1 146 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 YTHDF3Q7Z739 585 aaKnown RBP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 MARCH3Q86UD3 253 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 KIF18BQ86Y91 864 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 P3H2Q8IVL5 708 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 ZNF619Q8N2I2 560 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 L3MBTL4Q8NA19 623 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 GATSQ8NAP1 163 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 SPATA4Q8NEY3 305 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 PPP1R14CQ8TAE6 165 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 FBXO30Q8TB52 745 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 FNDC9Q8TBE3 224 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 TRPC4APQ8TEL6 797 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 TP53INP1Q96A56 240 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 CTHRC1Q96CG8 243 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 PGM2Q96G03 612 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 TMEM41AQ96HV5 264 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 LCORQ96JN0 433 aaPredicted RBP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 ZNF681Q96N22 645 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 FRG2BQ96QU4 278 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 MED18Q9BUE0 208 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 PINK1Q9BXM7 581 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 KLHL4Q9C0H6 718 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 ACSS3Q9H6R3 686 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 CALHM2Q9HA72 323 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 WDR41Q9HAD4 459 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 FOLH1BQ9HBA9 442 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 MS4A12Q9NXJ0 267 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 QPCTLQ9NXS2 382 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 NINJ2Q9NZG7 142 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 WHRNQ9P202 907 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 XPR1Q9UBH6 696 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 ZNF639Q9UID6 485 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 DKKL1Q9UK85 242 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 PCTPQ9UKL6 214 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 EXO1Q9UQ84 846 aaKnown RBP6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 ZNF337Q9Y3M9 751 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 TESMINQ9Y4I5 508 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 TIMM22Q9Y584 194 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 PCDHB14Q9Y5E9 798 aa6.17□□□□□ -1.42
PRPF40B-214ENST00000551320 DSCAMO60469 2012 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 GXYLT2A0PJZ3 443 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 FAM47E-STBD1D6RA91 191 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 H3BML4 177 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 FOXE1O00358 373 aaPredicted RBP6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 CASKO14936 926 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms