RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 GABRA5P31644 462 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 ADH7P40394 386 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 SLC1A3P43003 542 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 PUDPQ08623 228 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 NOGQ13253 232 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 LRRC37A5PQ49AS3 106 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.64□□□□□ -0.875e-10■■■■■ 38
SMARCC2-209ENST00000550164 GET4Q7L5D6 327 aaPredicted RBP9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 SERPINA12Q8IW75 414 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 MMP21Q8N119 569 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 IL17RDQ8NFM7 739 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 CHTF18Q8WVB6 975 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 NXPE2Q96DL1 559 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 KXD1Q9BQD3 176 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 ASCC3Q8N3C0 2202 aaKnown RBP9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 GRXCR1A8MXD5 290 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 HOXC11O43248 304 aaPredicted RBP9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 UBXN7O94888 489 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 GYPBP06028 91 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 TACSTD2P09758 323 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 MLLT3P42568 568 aaPredicted RBP9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 TAF13Q15543 124 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 HES5Q5TA89 166 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 LIPIQ6XZB0 460 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 FBXO15Q8NCQ5 510 aaPredicted RBP9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 OR4K14Q8NGD5 310 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 OR5W2Q8NH69 310 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 ACTR6Q9GZN1 396 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 ELL3Q9HB65 397 aaPredicted RBP9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 ZNF334Q9HCZ1 680 aaPredicted RBP9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 CUEDC1Q9NWM3 386 aaPredicted RBP9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 MARCH5Q9NX47 278 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 OR6C2Q9NZP2 312 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 CLEC4EQ9ULY5 219 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 SLC7A7Q9UM01 511 aa9.64□□□□□ -0.87
SMARCC2-209ENST00000550164 C1orf226A1L170 272 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 ANTXRLA6NF34 631 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 B4DXG7 233 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 RP2O75695 350 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 SOX30O94993 753 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 PAHP00439 452 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 ETV5P41161 510 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 SLC6A12P48065 614 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 ETV1P50549 477 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 SEC13P55735 322 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 SIM1P81133 766 aaPredicted RBP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 ELOAQ14241 798 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 KIAA0040Q15053 153 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 TP53I3Q53FA7 332 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 RPTNQ6XPR3 784 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 VRK2Q86Y07 508 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 MS4A15Q8N5U1 240 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 OR4K13Q8NH42 304 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 SLC25A46Q96AG3 418 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 POLDIP3Q9BY77 421 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 PIGUQ9H490 435 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 TMEM38AQ9H6F2 299 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 LYARQ9NX58 379 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 DIMT1Q9UNQ2 313 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 NEU3Q9UQ49 428 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 TMEM5Q9Y2B1 443 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 EDDM13A0A1B0GTR0 161 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 ZAR1LA6NP61 321 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 FGF18O76093 207 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 MT-ND4P03905 459 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 CD2P06729 351 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 TIMP2P16035 220 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 PSMA3P25788 255 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 RAB33AQ14088 237 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 GBX1Q14549 363 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 SEC23BQ15437 767 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 C1QTNF12Q5T7M4 302 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 ALG1LQ6GMV1 187 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 NANOGP1Q8N7R0 232 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 ZNF248Q8NDW4 579 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 OR6T1Q8NGN1 323 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 WDR20Q8TBZ3 569 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 THEM6Q8WUY1 208 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 HMGB4Q8WW32 186 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 PKMYT1Q99640 499 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 SGIP1Q9BQI5 828 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 SLC6A15Q9H2J7 730 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 COPZ2Q9P299 210 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 UPB1Q9UBR1 384 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 ASB4Q9Y574 426 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 F5P12259 2224 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 PSMD9O00233 223 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 CREBL2O60519 120 aaPredicted RBP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 ALDOBP05062 364 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 MMP11P24347 488 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 AK4P27144 223 aaPredicted RBP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 GNALP38405 381 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 DNASE1L1P49184 302 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 MRPL19P49406 292 aaKnown RBP9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 MINDY4Q4G0A6 757 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 C3orf38Q5JPI3 329 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 GLCCI1Q86VQ1 547 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 NRROSQ86YC3 692 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 GALNT11Q8NCW6 608 aa9.63□□□□□ -0.87
SMARCC2-209ENST00000550164 OR52E2Q8NGJ4 325 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms