RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 C9JVG2 144 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 GMFGO60234 142 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 C6orf47O95873 294 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 C1QCP02747 245 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 PRPS2P11908 318 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 BMP7P18075 431 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 AGAP20933 346 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 GRK2P25098 689 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 IL12BP29460 328 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 EVI2BP34910 448 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 HPCAL1P37235 193 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 STARP49675 285 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 RNF144AP50876 292 aaPredicted RBP8.9□□□□□ -0.98
HDAC7-229ENST00000549883 RPL14P50914 215 aaKnown RBP8.9□□□□□ -0.98
HDAC7-229ENST00000549883 PNLIPRP2P54317 469 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 RPP38P78345 283 aaKnown RBP8.9□□□□□ -0.98
HDAC7-229ENST00000549883 PHC1P78364 1004 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 EMX2Q04743 252 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 STX5Q13190 355 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 STX3Q13277 289 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 CASP8Q14790 479 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 GRAMD1BQ3KR37 738 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 CYP27C1Q4G0S4 372 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 CCNJQ5T5M9 372 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 C1orf185Q5T7R7 199 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 WLSQ5T9L3 541 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 VASNQ6EMK4 673 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 MARCH3Q86UD3 253 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 ULK2Q8IYT8 1036 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 CLECL1Q8IZS7 167 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 NAXEQ8NCW5 288 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 NUP43Q8NFH3 380 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 GPR151Q8TDV0 419 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 SLC9A6Q92581 669 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 RND1Q92730 232 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 HOXB13Q92826 284 aaPredicted RBP8.9□□□□□ -0.98
HDAC7-229ENST00000549883 SARAFQ96BY9 339 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 COQ8BQ96D53 544 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 TMCO6Q96DC7 493 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 FAM120BQ96EK7 910 aaKnown RBP8.9□□□□□ -0.98
HDAC7-229ENST00000549883 ZBED6CLQ96FA7 236 aaPredicted RBP8.9□□□□□ -0.98
HDAC7-229ENST00000549883 WDYHV1Q96HA8 205 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 CXorf36Q9H7Y0 433 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 ACSS1Q9NUB1 689 aaPredicted RBP8.9□□□□□ -0.98
HDAC7-229ENST00000549883 MED11Q9P086 117 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 NTMQ9P121 344 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 B4GALT7Q9UBV7 327 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 HAO1Q9UJM8 370 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 CBLCQ9ULV8 474 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 KLF2Q9Y5W3 355 aaPredicted RBP8.9□□□□□ -0.98
HDAC7-229ENST00000549883 WIF1Q9Y5W5 379 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 KCNE3Q9Y6H6 103 aa8.9□□□□□ -0.98
HDAC7-229ENST00000549883 ITPR2Q14571 2701 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 NOTCH2Q04721 2471 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 HEATR5AQ86XA9 2040 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 A0A1W2PRB8 838 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 SDHDO14521 159 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 ANKRD28O15084 1053 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 EMC8O43402 210 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 ZIC3O60481 467 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 ABCB7O75027 752 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 ERLIN1O75477 346 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 SLITRK5O94991 958 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 NKX2-2O95096 273 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 UTS2O95399 124 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 IL33O95760 270 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 ALDOCP09972 364 aaKnown RBP8.89□□□□□ -0.99
HDAC7-229ENST00000549883 ELAVL4P26378 380 aaKnown RBP8.89□□□□□ -0.99
HDAC7-229ENST00000549883 MAPK1P28482 360 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 KRT20P35900 424 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 CLDN8P56748 225 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 MRPS22P82650 360 aaKnown RBP8.89□□□□□ -0.99
HDAC7-229ENST00000549883 SNTA1Q13424 505 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 EFR3AQ14156 821 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 PGS1Q32NB8 556 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 ACSF3Q4G176 576 aaPredicted RBP8.89□□□□□ -0.99
HDAC7-229ENST00000549883 CPTPQ5TA50 214 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 OR4F3Q6IEY1 312 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 MFSD12Q6NUT3 480 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 FIGNL1Q6PIW4 674 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 B3GNT6Q6ZMB0 384 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 OLIG3Q7RTU3 272 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 MAVSQ7Z434 540 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 LSRQ86X29 649 aaPredicted RBP8.89□□□□□ -0.99
HDAC7-229ENST00000549883 PLCZ1Q86YW0 608 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 TRIM42Q8IWZ5 723 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 TNIP2Q8NFZ5 429 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 OR2M3Q8NG83 312 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 OR5M1Q8NGP8 315 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 OR10Q1Q8NGQ4 319 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 OR4C3Q8NH37 302 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 OR5AK3PQ8NH89 298 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 LILRB4Q8NHJ6 448 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 ZFP28Q8NHY6 868 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 CA5BP1Q8WTZ4 195 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 MTERF3Q96E29 417 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 TEX37Q96LM6 180 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 MS4A4EQ96PG1 132 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 OR2B2Q9GZK3 357 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 DSN1Q9H410 356 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms