RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 LOC105369274A0A096LPK9 316 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 LOC102723532A0A0G2JNH3 316 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 PEX12O00623 359 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 SCG5P05408 212 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 ACVR1BP36896 505 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 FUT5Q11128 374 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 SFSWAPQ12872 951 aaKnown RBP12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 AGERQ15109 404 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 MFSD4BQ5TF39 518 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 TRIQKQ629K1 86 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 POMZP3Q6PJE2 187 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 NUDT18Q6ZVK8 323 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 OR4N4Q8N0Y3 316 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 GATSQ8NAP1 163 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 C19orf18Q8NEA5 215 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 RIPOR3Q96MK2 946 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 KCTD7Q96MP8 289 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 SIGLEC11Q96RL6 698 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 CCDC3Q9BQI4 270 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 PBX4Q9BYU1 374 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 TP63Q9H3D4 680 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 ACSL5Q9ULC5 683 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 TRAV27A0A087WT01 109 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 SH3D21A4FU49 640 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 PLOD3O60568 738 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 HPGDSO60760 199 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 SOX30O94993 753 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 FCER2P06734 321 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 SLC35G6P0C7Q6 338 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 IGFALSP35858 605 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 CCR4P51679 360 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 C21orf58P58505 322 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 GAB4Q2WGN9 574 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 KRT74Q7RTS7 529 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 SYT9Q86SS6 491 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 SUN3Q8TAQ9 357 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 RASSF5Q8WWW0 418 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 WDR34Q96EX3 536 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 SIPA1Q96FS4 1042 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 FAM210AQ96ND0 272 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 WACQ9BTA9 647 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 IFT27Q9BW83 186 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 TRIM45Q9H8W5 580 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 PELI2Q9HAT8 420 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 ZNF232Q9UNY5 417 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 CMAHPQ9Y471 501 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 TRIOBPQ9H2D6 2365 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 HTR3EA5X5Y0 456 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 TAF4O00268 1085 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 SEMA3DO95025 777 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 KLF8O95600 359 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 EPPINO95925 133 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 LALBAP00709 142 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 IFI30P13284 250 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 ACSL1P33121 698 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 SHC2P98077 582 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 TBRG1Q3YBR2 411 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 TMEM52BQ4KMG9 183 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 CCDC80Q76M96 950 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 FBXO15Q8NCQ5 510 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 OR2L5Q8NG80 312 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 CREB3L4Q8TEY5 395 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 HMGB4Q8WW32 186 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 UFD1Q92890 307 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 APOOQ9BUR5 198 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 SEC14L4Q9UDX3 406 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 CCDC182A6NF36 153 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 CLUP10909 449 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 IL7P13232 177 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 LAMP2P13473 410 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 GRPRP30550 384 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 CASP3P42574 277 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 HMGA2P52926 109 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 HCCSP53701 268 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 RACK1P63244 317 aaKnown RBP12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 COX18Q8N8Q8 333 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 PFN4Q8NHR9 129 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 OR1E3Q8WZA6 343 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 HERVK_113Q902F9 699 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 ELP4Q96EB1 424 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 SLC35A4Q96G79 324 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 CDCA4Q9BXL8 241 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 CRISPLD2Q9H0B8 497 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 BEX1Q9HBH7 125 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 MAN2C1Q9NTJ4 1040 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 THAP10Q9P2Z0 257 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 ZNF221Q9UK13 617 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 MRPS2Q9Y399 296 aaKnown RBP12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 SPAG17Q6Q759 2223 aa12.8□□□□□ -0.36
PRPF40B-209ENST00000548825 A0A0A6YYD5 115 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 FAM171A2A8MVW0 826 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 HOXD12P35452 270 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 CRYBB2P43320 205 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 ANXA11P50995 505 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 PGDP52209 483 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 PPP1CAP62136 330 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 RGS1Q08116 209 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 PCDH1Q08174 1060 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 RPA4Q13156 261 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms