RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 SERPINA13PQ6UXR4 307 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 ZNF367Q7RTV3 350 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 SERPINA12Q8IW75 414 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 SLC30A8Q8IWU4 369 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 TBC1D19Q8N5T2 526 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 OR8S1Q8NH09 359 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 ADAMTS15Q8TE58 950 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 HYLS1Q96M11 299 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 SNX18Q96RF0 628 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 P2RY13Q9BPV8 354 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 MAPKAP1Q9BPZ7 522 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 IFT27Q9BW83 186 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 KCNN2Q9H2S1 579 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 SLA2Q9H6Q3 261 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 KRCC1Q9NPI7 259 aaPredicted RBP5.17□□□□□ -1.58
LIMA1-203ENST00000547825 IMP3Q9NV31 184 aaKnown RBP5.17□□□□□ -1.58
LIMA1-203ENST00000547825 TAS2R3Q9NYW6 316 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 OR6C2Q9NZP2 312 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 MUTYHQ9UIF7 546 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 B3GALT1Q9Y5Z6 326 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 IRAK3Q9Y616 596 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 SEC16AO15027 2179 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 A0A1B0GVM2 712 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 SH3D21A4FU49 640 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 METTL15A6NJ78 407 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 TTC34A8MYJ7 566 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 H3BUI4 141 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 KMOO15229 486 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 ARPC5O15511 151 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 CHST10O43529 356 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 OR1F1O43749 312 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 AKAP8O43823 692 aaKnown RBP5.16□□□□□ -1.58
LIMA1-203ENST00000547825 REM1O75628 298 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 KCNK2O95069 426 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 CDK1P06493 297 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 LAMP2P13473 410 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 MTHFD2P13995 350 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 ENPP1P22413 925 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 RPS19P39019 145 aaKnown RBP5.16□□□□□ -1.58
LIMA1-203ENST00000547825 SOX2P48431 317 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 POLR2LP62875 67 aaKnown RBP5.16□□□□□ -1.58
LIMA1-203ENST00000547825 ZNF234Q14588 700 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 ARHGAP15Q53QZ3 475 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 ZCCHC12Q6PEW1 402 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 ARSKQ6UWY0 536 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 CFAP77Q6ZQR2 320 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 DBF4BQ8NFT6 615 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 OR51L1Q8NGJ5 315 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 DYNC2LI1Q8TCX1 351 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 NT5C3BQ969T7 300 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 ELMOD3Q96FG2 381 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 QRFPRQ96P65 431 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 MCCC1Q96RQ3 725 aaPredicted RBP5.16□□□□□ -1.58
LIMA1-203ENST00000547825 UHRF1Q96T88 793 aaPredicted RBP5.16□□□□□ -1.58
LIMA1-203ENST00000547825 CCDC32Q9BV29 185 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 GPN1Q9HCN4 374 aaPredicted RBP5.16□□□□□ -1.58
LIMA1-203ENST00000547825 TREM1Q9NP99 234 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 ALG5Q9Y673 324 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 A0A0U1RQF3 1178 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 PSMD9O00233 223 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 RETP07949 1114 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 PRKCAP17252 672 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 KELP23276 732 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 PYCR1P32322 319 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 CSKP41240 450 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 RGRP47804 291 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 HNMTP50135 292 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 EPHB3P54753 998 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 CTBP2P56545 445 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 CLDN8P56748 225 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 SLC35A2P78381 396 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 HOXC5Q00444 222 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 GRIK2Q13002 908 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 DOC2BQ14184 412 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 COQ5Q5HYK3 327 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 PRSS36Q5K4E3 855 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 ADNP2Q6IQ32 1131 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 AGTRAPQ6RW13 159 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 LRRN1Q6UXK5 716 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 ZNF551Q7Z340 670 aaPredicted RBP5.16□□□□□ -1.58
LIMA1-203ENST00000547825 GALNTL5Q7Z4T8 443 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 SNX20Q7Z614 316 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 ZAR1Q86SH2 424 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 THOC6Q86W42 341 aaKnown RBP5.16□□□□□ -1.58
LIMA1-203ENST00000547825 PARGQ86W56 976 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 C17orf64Q86WR6 236 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 ENTHD1Q8IYW4 607 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 KLHL36Q8N4N3 616 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 TP53I13Q8NBR0 393 aaPredicted RBP5.16□□□□□ -1.58
LIMA1-203ENST00000547825 CD200R1Q8TD46 325 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 ST8SIA2Q92186 375 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 RFKQ969G6 155 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 OTUB2Q96DC9 234 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 MSLNLQ96KJ4 702 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 SPATA5L1Q9BVQ7 753 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 OR51I1Q9H343 314 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 RLIMQ9NVW2 624 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 NLE1Q9NVX2 485 aaPredicted RBP5.16□□□□□ -1.58
LIMA1-203ENST00000547825 SLC39A1Q9NY26 324 aa5.16□□□□□ -1.58
LIMA1-203ENST00000547825 MED11Q9P086 117 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms