RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 RAB3IL1Q8TBN0 382 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 CD99L2Q8TCZ2 262 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 PNPLA2Q96AD5 504 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 UPRTQ96BW1 309 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 OMA1Q96E52 524 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 SCRN2Q96FV2 425 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 COQ2Q96H96 371 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 LURAP1Q96LR2 239 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 CCNL2Q96S94 520 aaPredicted RBP3.71□□□□□ -1.82
SCAF11-210ENST00000547654 NPY6RQ99463 290 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 RIT2Q99578 217 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 SLC25A19Q9HC21 320 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 UFSP2Q9NUQ7 469 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 TEX10Q9NXF1 929 aaPredicted RBP3.71□□□□□ -1.82
SCAF11-210ENST00000547654 PIPOXQ9P0Z9 390 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 RNF6Q9Y252 685 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 SLC9A8Q9Y2E8 581 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 CCDC7Q96M83 1385 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 ARHGAP23Q9P227 1491 aa3.71□□□□□ -1.82
SCAF11-210ENST00000547654 UBR1Q8IWV7 1749 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 WDR90Q96KV7 1748 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 GREB1LQ9C091 1923 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 KIF26BQ2KJY2 2108 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 SRRM4A7MD48 611 aaKnown RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 H0YL77 283 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 H3BMH7 237 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 N4BP1O75113 896 aaKnown RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 NDUFB10O96000 172 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 KRT14P02533 472 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 CAPN1P07384 714 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 TPM1P09493 284 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 ALPIP09923 528 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 STAG3L3P0CL85 134 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 SLC2A2P11168 524 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 ANXA3P12429 323 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 LIFP15018 202 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 RPL35AP18077 110 aaKnown RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 GIFP27352 417 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 CDH4P55283 916 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 BACE1P56817 501 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 BTG1P62324 171 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 MRPS6P82932 125 aaKnown RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 SRSF9Q13242 221 aaKnown RBP eCLIP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 GANABQ14697 944 aaKnown RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 DPYSL2Q16555 572 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 ZNF74Q16587 644 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 CDKN3Q16667 212 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 HAGHQ16775 308 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 FAM106AQ4KMX7 169 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 BCL7AQ4VC05 210 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 SPANXN2Q5MJ10 180 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 TCHHL1Q5QJ38 904 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 KCNIP4Q6PIL6 250 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 ZNF852Q6ZMS4 543 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 KDM7AQ6ZMT4 941 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 Q6ZVQ6 151 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 Q7L0L9 218 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 TMCO2Q7Z6W1 182 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 DEFB132Q7Z7B7 95 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 KIAA1328Q86T90 577 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 ITIH5Q86UX2 942 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 SERINC5Q86VE9 423 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 CDR2LQ86X02 465 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 TMEM17Q86X19 198 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 METTL27Q8N6F8 245 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 RELL2Q8NC24 303 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 SECTM1Q8WVN6 248 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 RAPGEF5Q92565 580 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 MYLPFQ96A32 169 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 MCUR1Q96AQ8 359 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 PRICKLE1Q96MT3 831 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 GSDMAQ96QA5 445 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 NKX3-1Q99801 234 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 CITED1Q99966 193 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 TDRD1Q9BXT4 1180 aaKnown RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 ROPN1BQ9BZX4 212 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 CXXC4Q9H2H0 198 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 DCTPP1Q9H773 170 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 EBF2Q9HAK2 575 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 RAB18Q9NP72 206 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.7□□□□□ -1.82
SCAF11-210ENST00000547654 KLRF1Q9NZS2 232 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 ONECUT1Q9UBC0 465 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 RNF115Q9Y4L5 304 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 NINLQ9Y2I6 1382 aa3.7□□□□□ -1.82
SCAF11-210ENST00000547654 CASZ1Q86V15 1759 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 GLI3P10071 1580 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 NRKQ7Z2Y5 1582 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 MLH3Q9UHC1 1453 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 hCG_38984A0A1B0GV85 526 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 ESYT2A0FGR8 921 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 LMO7DNF2Z398 122 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 SIGLEC5O15389 551 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 TSPAN2O60636 221 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 DNAJB6O75190 326 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 LRCH4O75427 683 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 MTRF1O75570 445 aaKnown RBP3.69□□□□□ -1.82
SCAF11-210ENST00000547654 SLITRK3O94933 977 aa3.69□□□□□ -1.82
SCAF11-210ENST00000547654 RHOXF2BP0C7M4 288 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms