RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ZNF551Q7Z340 670 aaPredicted RBP12.08□□□□□ -0.48
CPSF6-204ENST00000547486 C10orf107Q8IVU9 208 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 GCNT2Q8N0V5 402 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 C4orf33Q8N1A6 199 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 FADS6Q8N9I5 356 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 OR2T11Q8NH01 316 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 GFM2Q969S9 779 aaKnown RBP12.08□□□□□ -0.48
CPSF6-204ENST00000547486 TM9SF2Q99805 663 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 CXXC4Q9H2H0 198 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 TUBB1Q9H4B7 451 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 RRAGDQ9NQL2 400 aaPredicted RBP12.08□□□□□ -0.48
CPSF6-204ENST00000547486 MED11Q9P086 117 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 DKKL1Q9UK85 242 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 GXYLT2A0PJZ3 443 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 H0YC42 278 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 H3BQF6 201 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 COPEO14579 308 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 TNFSF13O75888 250 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 IGKV1D-16P01601 117 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 PRPH2P23942 346 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 SUCLG1P53597 346 aaKnown RBP12.07□□□□□ -0.48
CPSF6-204ENST00000547486 TPD52P55327 224 aaPredicted RBP12.07□□□□□ -0.48
CPSF6-204ENST00000547486 DSCR4P56555 118 aaPredicted RBP12.07□□□□□ -0.48
CPSF6-204ENST00000547486 RIPPLY3P57055 190 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 NAA20P61599 178 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 SLC18A2Q05940 514 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 STX5Q13190 355 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 BCL2A1Q16548 175 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 RFTN2Q52LD8 501 aaPredicted RBP12.07□□□□□ -0.48
CPSF6-204ENST00000547486 LIPMQ5VYY2 423 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 APOOLQ6UXV4 268 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 IKBIPQ70UQ0 350 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 LUZP2Q86TE4 346 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 MARCH3Q86UD3 253 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 KIF18BQ86Y91 864 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 CNPY4Q8N129 248 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 CCDC63Q8NA47 563 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 OR4K17Q8NGC6 315 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 OR5M1Q8NGP8 315 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 DUSP19Q8WTR2 217 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 NINJ1Q92982 152 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 CIDECQ96AQ7 238 aaPredicted RBP12.07□□□□□ -0.48
CPSF6-204ENST00000547486 FOXC2Q99958 501 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 LMF2Q9BU23 707 aaKnown RBP12.07□□□□□ -0.48
CPSF6-204ENST00000547486 SFXN3Q9BWM7 321 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 GATA5Q9BWX5 397 aaPredicted RBP12.07□□□□□ -0.48
CPSF6-204ENST00000547486 RBM24Q9BX46 236 aaKnown RBP12.07□□□□□ -0.48
CPSF6-204ENST00000547486 DDX18Q9NVP1 670 aaKnown RBP12.07□□□□□ -0.48
CPSF6-204ENST00000547486 GALNT8Q9NY28 637 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 PPP4R1LQ9P1A2 415 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 BAIAP2L1Q9UHR4 511 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 PLEKHA6Q9Y2H5 1048 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 ZNF337Q9Y3M9 751 aa12.07□□□□□ -0.48
CPSF6-204ENST00000547486 PRRC2AP48634 2157 aaKnown RBP12.06□□□□□ -0.48
CPSF6-204ENST00000547486 NPIPB8E9PQR5 432 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 SLC28A1O00337 649 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 AZIN1O14977 448 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 AKAP10O43572 662 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 HCRTR2O43614 444 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 SLITRK5O94991 958 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 IL33O95760 270 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 LINC00032P0C843 101 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 NTSP30990 170 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 GABRA3P34903 492 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 MRPS22P82650 360 aaKnown RBP12.06□□□□□ -0.48
CPSF6-204ENST00000547486 SORDQ00796 357 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 PCLAFQ15004 111 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 DECR1Q16698 335 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 ZNF385BQ569K4 471 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 EXOC3L1Q86VI1 746 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 UBQLNLQ8IYU4 475 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 GOT1L1Q8NHS2 421 aaPredicted RBP12.06□□□□□ -0.48
CPSF6-204ENST00000547486 PIK3R3Q92569 461 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 RMND5BQ96G75 393 aaPredicted RBP12.06□□□□□ -0.48
CPSF6-204ENST00000547486 FCRL1Q96LA6 429 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 ZFP3Q96NJ6 502 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 TMUB1Q9BVT8 246 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 LRTM1Q9HBL6 345 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 C1orf109Q9NX04 203 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 FIS1Q9Y3D6 152 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 DNAJC15Q9Y5T4 150 aa12.06□□□□□ -0.48
CPSF6-204ENST00000547486 A0A1W2PNV4 684 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 A8MXE2 369 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 RGS14O43566 566 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 SDC1P18827 310 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 HK1P19367 917 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 MAP3K8P41279 467 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 RFX3P48380 749 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 HSPB3Q12988 150 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 UGT3A2Q3SY77 523 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 GALNT10Q86SR1 603 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 GRAMD2AQ8IUY3 354 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 OR2W6PQ8NHA6 318 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 CLHC1Q8NHS4 586 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 FIG4Q92562 907 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 HOXB13Q92826 284 aaPredicted RBP12.05□□□□□ -0.48
CPSF6-204ENST00000547486 STARD4Q96DR4 205 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 METTL2AQ96IZ6 378 aaKnown RBP12.05□□□□□ -0.48
CPSF6-204ENST00000547486 TSSK3Q96PN8 268 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 299.3 ms