RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 ADCK2Q7Z695 626 aa16.1■□□□□ 0.17
RBFOX1-207ENST00000547338 OR4C15Q8NGM1 316 aa16.1■□□□□ 0.17
RBFOX1-207ENST00000547338 TAMM41Q96BW9 452 aa16.1■□□□□ 0.17
RBFOX1-207ENST00000547338 C12orf43Q96C57 262 aaKnown RBP16.1■□□□□ 0.17
RBFOX1-207ENST00000547338 ARHGAP9Q9BRR9 750 aa16.1■□□□□ 0.17
RBFOX1-207ENST00000547338 DPH7Q9BTV6 452 aa16.1■□□□□ 0.17
RBFOX1-207ENST00000547338 RIBC2Q9H4K1 309 aa16.1■□□□□ 0.17
RBFOX1-207ENST00000547338 ZNF556Q9HAH1 456 aa16.1■□□□□ 0.17
RBFOX1-207ENST00000547338 PLCXD1Q9NUJ7 323 aa16.1■□□□□ 0.17
RBFOX1-207ENST00000547338 LYARQ9NX58 379 aaKnown RBP16.1■□□□□ 0.17
RBFOX1-207ENST00000547338 MDC1Q14676 2089 aaKnown RBP16.1■□□□□ 0.17
RBFOX1-207ENST00000547338 FITM1A5D6W6 292 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 SERPINB7O75635 380 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 IFNW1P05000 195 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 TFPTP0C1Z6 253 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 NTSP30990 170 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 XCR1P46094 333 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 CCT3P49368 545 aaKnown RBP16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 RPS15P62841 145 aaKnown RBP16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 C19orf57Q0VDD7 668 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 RAPSNQ13702 412 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 PRSS53Q2L4Q9 553 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 CTU2Q2VPK5 515 aaKnown RBP16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 SPDYE7PQ495Y7 208 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 XAF1Q6GPH4 301 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 ABHD17CQ6PCB6 329 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 PAQR7Q86WK9 346 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 SAMD14Q8IZD0 417 aaPredicted RBP16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 DEPDC4Q8N2C3 294 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 PARP8Q8N3A8 854 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 APOBEC4Q8WW27 367 aaKnown RBP16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 FAM117AQ9C073 453 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 SLC35C2Q9NQQ7 365 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 PSME2Q9UL46 239 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 POLHQ9Y253 713 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 K7EM74 188 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 TMPRSS11DO60235 418 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 HBQ1P09105 142 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 HIST1H1TP22492 207 aaPredicted RBP16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 ALDH9A1P49189 494 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 SNRPNP63162 240 aaKnown RBP16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 PPP1R8Q12972 351 aaKnown RBP16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 MAD2L1BPQ15013 274 aaPredicted RBP16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 GTF2IRD2BQ6EKJ0 949 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 MRPL14Q6P1L8 145 aaKnown RBP16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 COX15Q7KZN9 410 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 GTF2IRD2Q86UP8 949 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 CROCCP3Q8IVE0 287 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 LINC00471Q8N535 108 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 MUL1Q969V5 352 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 MS4A6EQ96DS6 147 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 SORBS1Q9BX66 1292 aaKnown RBP16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 PRDM7Q9NQW5 492 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 SRPK3Q9UPE1 567 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 SNX8Q9Y5X2 465 aa16.09■□□□□ 0.17
RBFOX1-207ENST00000547338 A0A0J9YVX5 310 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 OXSR1O95747 527 aaPredicted RBP16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 ONECUT2O95948 504 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 PPP2R1BP30154 601 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 BCL6P41182 706 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 LIMS1P48059 325 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 VSX2P58304 361 aaPredicted RBP16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 RPP38P78345 283 aaKnown RBP16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 NKAIN1Q4KMZ8 207 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 NDUFAF5Q5TEU4 345 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 LAIR2Q6ISS4 152 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 LINC00299Q6ZSB3 139 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 TSEN54Q7Z6J9 526 aaKnown RBP16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 ZNF605Q86T29 641 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 KRT73Q86Y46 540 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 ARHGEF39Q8N4T4 335 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 OR10G2Q8NGC3 310 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 NT5CQ8TCD5 201 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 MIPOL1Q8TD10 442 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 NR4A3Q92570 626 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 PROX1Q92786 737 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 BCL2L10Q9HD36 194 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 SIRT3Q9NTG7 399 aaPredicted RBP16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 GIMAP4Q9NUV9 329 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 P2RX2Q9UBL9 471 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 TUBD1Q9UJT1 453 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 ASB4Q9Y574 426 aa16.08■□□□□ 0.16
RBFOX1-207ENST00000547338 URADA6NGE7 173 aa16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 RTCAO00442 366 aaKnown RBP16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 MPZL2O60487 215 aa16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 MITFO75030 526 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 IL7RP16871 459 aa16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 CCNA2P20248 432 aa16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 ATP5A1P25705 553 aaKnown RBP16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 AQP1P29972 269 aa16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 GGT2P36268 569 aa16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 YAP1P46937 504 aaKnown RBP16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 SLC35A2P78381 396 aa16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 DCDP81605 110 aaKnown RBP16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 RGS1Q08116 209 aa16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 NFATC3Q12968 1075 aa16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 NEDD8Q15843 81 aa16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 PRTGQ2VWP7 1150 aa16.07■□□□□ 0.16
RBFOX1-207ENST00000547338 GPR107Q5VW38 600 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms