RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 PTBP1P26599 531 aaKnown RBP eCLIP2.39□□□□□ -2.03
CCDC38-204ENST00000546816 TMOD1P28289 359 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 MARCKSP29966 332 aaPredicted RBP2.39□□□□□ -2.03
CCDC38-204ENST00000546816 SLC6A8P48029 635 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 SGSHP51688 502 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 CNN1P51911 297 aaKnown RBP2.39□□□□□ -2.03
CCDC38-204ENST00000546816 RAG2P55895 527 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 PPP1R8Q12972 351 aaKnown RBP2.39□□□□□ -2.03
CCDC38-204ENST00000546816 MPPED2Q15777 294 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 CYBRD1Q53TN4 286 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 DCST2Q5T1A1 773 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 CCDC91Q7Z6B0 441 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 YRDCQ86U90 279 aaKnown RBP2.39□□□□□ -2.03
CCDC38-204ENST00000546816 SERPINA12Q8IW75 414 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 PEX5LQ8IYB4 626 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 LEMD2Q8NC56 503 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 ADAMTS16Q8TE57 1224 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 TMEM45BQ96B21 275 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 STARD4Q96DR4 205 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 CTRCQ99895 268 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 CBWD1Q9BRT8 395 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 APOOQ9BUR5 198 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 FTHL17Q9BXU8 183 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 NANOGQ9H9S0 305 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 PATZ1Q9HBE1 687 aaKnown RBP2.39□□□□□ -2.03
CCDC38-204ENST00000546816 EHFQ9NZC4 300 aa2.39□□□□□ -2.03
CCDC38-204ENST00000546816 NPC1L1Q9UHC9 1359 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 GTF3C1Q12789 2109 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 ZNF254O75437 659 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 FOXH1O75593 365 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 MMP23AO75900 390 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 GOSR1O95249 250 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 WISP3O95389 354 aaPredicted RBP2.38□□□□□ -2.03
CCDC38-204ENST00000546816 IGSF6O95976 241 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 TIMP1P01033 207 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 TOP1P11387 765 aaKnown RBP2.38□□□□□ -2.03
CCDC38-204ENST00000546816 CCL11P51671 97 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 OC90Q02509 493 aaPredicted RBP2.38□□□□□ -2.03
CCDC38-204ENST00000546816 BCL2L1Q07817 233 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 ZSWIM7Q19AV6 140 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 ZNF691Q5VV52 312 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 ZNF57Q68EA5 555 aaPredicted RBP2.38□□□□□ -2.03
CCDC38-204ENST00000546816 LEG1Q6P5S2 330 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 TOM1L2Q6ZVM7 507 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 GOLGA7Q7Z5G4 137 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 SYVN1Q86TM6 617 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 IQCA1Q86XH1 822 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 CCDC170Q8IYT3 715 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 CCDC71LQ8N9Z2 235 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 KIR2DL5BQ8NHK3 375 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 C18orf25Q96B23 403 aaPredicted RBP2.38□□□□□ -2.03
CCDC38-204ENST00000546816 CCDC51Q96ER9 411 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 VPS39Q96JC1 886 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 IL4I1Q96RQ9 567 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 NDUFAF3Q9BU61 184 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 TEX13AQ9BXU3 409 aaPredicted RBP2.38□□□□□ -2.03
CCDC38-204ENST00000546816 OR51J1Q9H342 316 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 GALPQ9UBC7 116 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 RAD54L2Q9Y4B4 1467 aa2.38□□□□□ -2.03
CCDC38-204ENST00000546816 USP6P35125 1406 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 FBLL1A6NHQ2 334 aaKnown RBP2.37□□□□□ -2.03
CCDC38-204ENST00000546816 TMEM110-MUSTN1A8MSY1 372 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 DFNA5O60443 496 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 SDC3O75056 442 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 SLC35G4P0C7Q5 338 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 SDC1P18827 310 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 EMDP50402 254 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 GPC3P51654 580 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 RPL32P62910 135 aaKnown RBP2.37□□□□□ -2.03
CCDC38-204ENST00000546816 HERVK_113P63132 956 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 ERVK-8P63133 956 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 NOP14P78316 857 aaKnown RBP2.37□□□□□ -2.03
CCDC38-204ENST00000546816 ZNF45Q02386 682 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 ZKSCAN8Q15776 578 aaPredicted RBP2.37□□□□□ -2.03
CCDC38-204ENST00000546816 PARP6Q2NL67 630 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 ZNF699Q32M78 642 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 XKR4Q5GH76 650 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 OR2B11Q5JQS5 317 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 PRAMEF7Q5VXH5 474 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 TMEM110Q86TL2 294 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 GPBP1Q86WP2 473 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 TPRX1Q8N7U7 411 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 SLC35E1Q96K37 410 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 DESI2Q9BSY9 194 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 ERVK-6Q9BXR3 956 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 NLNQ9BYT8 704 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 NACA2Q9H009 215 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 MID1IP1Q9NPA3 183 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 ELOVL2Q9NXB9 296 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 ZNF490Q9ULM2 529 aaPredicted RBP2.37□□□□□ -2.03
CCDC38-204ENST00000546816 ZMYM6O95789 1325 aa2.37□□□□□ -2.03
CCDC38-204ENST00000546816 A0A0U1RQG5 324 aaPredicted RBP2.36□□□□□ -2.03
CCDC38-204ENST00000546816 MACROD2A1Z1Q3 448 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 HTATSF1O43719 755 aaKnown RBP2.36□□□□□ -2.03
CCDC38-204ENST00000546816 HSF2BPO75031 334 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 GPX5O75715 221 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 CXCL14O95715 111 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 SEMG1P04279 462 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 PITPNBP48739 271 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 DAZ2Q13117 558 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms