RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 PIGMQ9H3S5 423 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 REEP4Q9H6H4 257 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 RASSF1Q9NS23 344 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 FAM120CQ9NX05 1096 aaKnown RBP8.5□□□□□ -1.05
YBX3-218ENST00000546298 MKS1Q9NXB0 559 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 CRIM1Q9NZV1 1036 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 FBXL2Q9UKC9 423 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 CCL27Q9Y4X3 112 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 CACNA1CQ13936 2221 aa8.5□□□□□ -1.05
YBX3-218ENST00000546298 CLCA1A8K7I4 914 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 KDM4EB2RXH2 506 aaPredicted RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 TMEM114B3SHH9 223 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 FADS1O60427 444 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 ZIC3O60481 467 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 NPHS1O60500 1241 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 NME6O75414 186 aaPredicted RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 GOSR1O95249 250 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 PSMG1O95456 288 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 CRHP06850 196 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 FGF4P08620 206 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 NUDT17P0C025 328 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 EPXP11678 715 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 HK1P19367 917 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 MAPK1P28482 360 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 GABRA3P34903 492 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 SERPINB5P36952 375 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 RPL3P39023 403 aaKnown RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 LHX2P50458 406 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 AGFG1P52594 562 aaKnown RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 GAS1P54826 345 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 DIO3P55073 304 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 MANFP55145 182 aaKnown RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 GANABQ14697 944 aaKnown RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 PCLAFQ15004 111 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 TESK1Q15569 626 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 PRSS53Q2L4Q9 553 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 GLYR1Q49A26 553 aaPredicted RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 OR2A2Q6IF42 318 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 LRIG3Q6UXM1 1119 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 R3HCC1LQ7Z5L2 792 aaKnown RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 ADGRE4PQ86SQ3 457 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 GRAMD2AQ8IUY3 354 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 MEIOBQ8N635 442 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 BANPQ8N9N5 519 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 C9orf106Q8NAJ2 232 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 GPR151Q8TDV0 419 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 NINJ1Q92982 152 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 INTS12Q96CB8 462 aaKnown RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 MTERF3Q96E29 417 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 APOPT1Q96IL0 206 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 EGLN2Q96KS0 407 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 TBL1XR1Q9BZK7 514 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 ROPN1BQ9BZX4 212 aaPredicted RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 CLEC4MQ9H2X3 399 aaPredicted RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 C12orf65Q9H3J6 166 aaKnown RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 DSN1Q9H410 356 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 ROPN1Q9HAT0 212 aaPredicted RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 TNFRSF12AQ9NP84 129 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 ACSS1Q9NUB1 689 aaPredicted RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 JKAMPQ9P055 326 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 SH3BP4Q9P0V3 963 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 STOML1Q9UBI4 398 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 RPH3AQ9Y2J0 694 aaPredicted RBP8.49□□□□□ -1.05
YBX3-218ENST00000546298 FIS1Q9Y3D6 152 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 TRAF6Q9Y4K3 522 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 DNAJC15Q9Y5T4 150 aa8.49□□□□□ -1.05
YBX3-218ENST00000546298 UTP20O75691 2785 aaKnown RBP8.48□□□□□ -1.05
YBX3-218ENST00000546298 FAM221AA4D161 298 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 A6NNC1 897 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 AKAP10O43572 662 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 HCRTR2O43614 444 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 UTS2O95399 124 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 LINC00032P0C843 101 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 DNASE1P24855 282 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 TACR1P25103 407 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 LCN1P31025 176 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 DNAJA1P31689 397 aaKnown RBP8.48□□□□□ -1.05
YBX3-218ENST00000546298 CPA2P48052 419 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 RFX3P48380 749 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 ART1P52961 327 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 CLDN18P56856 261 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 RPS3AP61247 264 aaKnown RBP8.48□□□□□ -1.05
YBX3-218ENST00000546298 RPL38P63173 70 aaKnown RBP8.48□□□□□ -1.05
YBX3-218ENST00000546298 C17orf67Q0P5P2 114 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 HSPB3Q12988 150 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 STX5Q13190 355 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 SNTB1Q13884 538 aaKnown RBP8.48□□□□□ -1.05
YBX3-218ENST00000546298 ARL13AQ5H913 290 aaPredicted RBP8.48□□□□□ -1.05
YBX3-218ENST00000546298 RAET1LQ5VY80 246 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 FBXW10Q5XX13 1052 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 KANK2Q63ZY3 851 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 ZCCHC12Q6PEW1 402 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 Q6ZSR9 355 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 ZNF551Q7Z340 670 aaPredicted RBP8.48□□□□□ -1.05
YBX3-218ENST00000546298 P4HA3Q7Z4N8 544 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 TRABD2AQ86V40 505 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 DDIASQ8IXT1 998 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 NATD1Q8N6N6 113 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 FADS6Q8N9I5 356 aa8.48□□□□□ -1.05
YBX3-218ENST00000546298 CDRT4Q8N9R6 151 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms