RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 BICRALQ6AI39 1079 aa18.79■□□□□ 0.6
HMGA2-211ENST00000545998 FAM98AQ8NCA5 519 aaKnown RBP18.79■□□□□ 0.6
HMGA2-211ENST00000545998 CPT1CQ8TCG5 803 aa18.79■□□□□ 0.6
HMGA2-211ENST00000545998 GRHL3Q8TE85 626 aa18.79■□□□□ 0.6
HMGA2-211ENST00000545998 RNF138Q8WVD3 245 aa18.79■□□□□ 0.6
HMGA2-211ENST00000545998 NTNG2Q96CW9 530 aa18.79■□□□□ 0.6
HMGA2-211ENST00000545998 BARD1Q99728 777 aaKnown RBP18.79■□□□□ 0.6
HMGA2-211ENST00000545998 FAM173AQ9BQD7 235 aa18.79■□□□□ 0.6
HMGA2-211ENST00000545998 SLAMF8Q9P0V8 285 aa18.79■□□□□ 0.6
HMGA2-211ENST00000545998 PCDHB14Q9Y5E9 798 aa18.79■□□□□ 0.6
HMGA2-211ENST00000545998 PINLYPA6NC86 204 aa18.78■□□□□ 0.6
HMGA2-211ENST00000545998 CYP4B1P13584 511 aa18.78■□□□□ 0.6
HMGA2-211ENST00000545998 PSMD4P55036 377 aaKnown RBP18.78■□□□□ 0.6
HMGA2-211ENST00000545998 POU6F2P78424 691 aaPredicted RBP18.78■□□□□ 0.6
HMGA2-211ENST00000545998 LRIF1Q5T3J3 769 aa18.78■□□□□ 0.6
HMGA2-211ENST00000545998 FAM180AQ6UWF9 173 aa18.78■□□□□ 0.6
HMGA2-211ENST00000545998 RNF130Q86XS8 419 aa18.78■□□□□ 0.6
HMGA2-211ENST00000545998 DNAJB8Q8NHS0 232 aa18.78■□□□□ 0.6
HMGA2-211ENST00000545998 TMCO6Q96DC7 493 aa18.78■□□□□ 0.6
HMGA2-211ENST00000545998 ANGPTL4Q9BY76 406 aa18.78■□□□□ 0.6
HMGA2-211ENST00000545998 OR51I1Q9H343 314 aa18.78■□□□□ 0.6
HMGA2-211ENST00000545998 ASF1BQ9NVP2 202 aa18.78■□□□□ 0.6
HMGA2-211ENST00000545998 ARMCX1Q9P291 453 aa18.78■□□□□ 0.6
HMGA2-211ENST00000545998 LEF1Q9UJU2 399 aaPredicted RBP18.78■□□□□ 0.6
HMGA2-211ENST00000545998 PCDHGB3Q9Y5G1 929 aa18.78■□□□□ 0.6
HMGA2-211ENST00000545998 DUXAA6NLW8 204 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 SLC22A2O15244 555 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 CCDC22O60826 627 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 KRT75O95678 551 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 RFX3P48380 749 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 DNASE1L1P49184 302 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 FOXO1Q12778 655 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 SNTA1Q13424 505 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.77■□□□□ 0.6
HMGA2-211ENST00000545998 TBCELQ5QJ74 424 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 ZNF324BQ6AW86 544 aaPredicted RBP18.77■□□□□ 0.6
HMGA2-211ENST00000545998 TNFAIP8L2Q6P589 184 aaPredicted RBP18.77■□□□□ 0.6
HMGA2-211ENST00000545998 FIGNL1Q6PIW4 674 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 MTDHQ86UE4 582 aaKnown RBP18.77■□□□□ 0.6
HMGA2-211ENST00000545998 ZFP62Q8NB50 900 aaPredicted RBP18.77■□□□□ 0.6
HMGA2-211ENST00000545998 POGLUT1Q8NBL1 392 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 METTL7AQ9H8H3 244 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 TPT1P8Q9HAU6 139 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 FBXO34Q9NWN3 711 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 SLC25A37Q9NYZ2 338 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 NDUFAF1Q9Y375 327 aa18.77■□□□□ 0.6
HMGA2-211ENST00000545998 PRAMEF25A6NGN4 478 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 ASNA1O43681 348 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 SLC28A2O43868 658 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 ICOSLGO75144 302 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 CRYABP02511 175 aaKnown RBP18.76■□□□□ 0.59
HMGA2-211ENST00000545998 PTGDSP41222 190 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 KHKP50053 298 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 MVDP53602 400 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 TLE1Q04724 770 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 CCNJQ5T5M9 372 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 ANGPTL8Q6UXH0 198 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 GALNT10Q86SR1 603 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 RETREG3Q86VR2 466 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 MSRB3Q8IXL7 192 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 DPP10Q8N608 796 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 PNPT1Q8TCS8 783 aaKnown RBP18.76■□□□□ 0.59
HMGA2-211ENST00000545998 FAR1Q8WVX9 515 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 AURKBQ96GD4 344 aaPredicted RBP18.76■□□□□ 0.59
HMGA2-211ENST00000545998 CCT8L2Q96SF2 557 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 DOHHQ9BU89 302 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 FLRT3Q9NZU0 649 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 CAPN7Q9Y6W3 813 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 TRBV5-3A0A0A0MS03 114 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 ANGPT2O15123 496 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 AGR2O95994 175 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 OR12D1P0DN82 309 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 RFC3P40938 356 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 KCNJ2P63252 427 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 TXNL4AP83876 142 aaKnown RBP18.76■□□□□ 0.59
HMGA2-211ENST00000545998 RNFT1Q5M7Z0 435 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 COX20Q5RI15 118 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 DCST2Q5T1A1 773 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 DLEU7Q6UYE1 221 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 ZAR1Q86SH2 424 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 CHDHQ8NE62 594 aaPredicted RBP18.76■□□□□ 0.59
HMGA2-211ENST00000545998 G6PC3Q9BUM1 346 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 AGPAT4Q9NRZ5 378 aa18.76■□□□□ 0.59
HMGA2-211ENST00000545998 TUBA8Q9NY65 449 aaPredicted RBP18.76■□□□□ 0.59
HMGA2-211ENST00000545998 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.76■□□□□ 0.59
HMGA2-211ENST00000545998 NCKAP5O14513 1909 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 HMGN4O00479 90 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 FBP2O00757 339 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 HS6ST1O60243 411 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 FADS1O60427 444 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 TRIM3O75382 744 aaPredicted RBP18.75■□□□□ 0.59
HMGA2-211ENST00000545998 GLSO94925 669 aaPredicted RBP18.75■□□□□ 0.59
HMGA2-211ENST00000545998 SNX4O95219 450 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 UTS2O95399 124 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 LCN1P31025 176 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 MAGEA8P43361 318 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 MAPRE2Q15555 327 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 HEPHL1Q6MZM0 1159 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 SLC30A6Q6NXT4 461 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 XAGE5Q8WWM1 108 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms