RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 SECISBP2Q96T21 854 aaKnown RBP8.21□□□□□ -1.1
TDP1-204ENST00000545686 MED28Q9H204 178 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 SLC23A1Q9UHI7 598 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 KLF15Q9UIH9 416 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 SLC13A4Q9UKG4 626 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 GPSM3Q9Y4H4 160 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 CD8B2A6NJW9 211 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 B8ZZF3 427 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 K7ESM1 405 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 KLF4O43474 513 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 PRNPP04156 253 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 CD8BP10966 210 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 GNSP15586 552 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 F8A1P23610 371 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 TRIM23P36406 574 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 NCBP2P52298 156 aaKnown RBP eCLIP8.2□□□□□ -1.1
TDP1-204ENST00000545686 PER3P56645 1201 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 ZNF791Q3KP31 576 aaPredicted RBP8.2□□□□□ -1.1
TDP1-204ENST00000545686 TMEM35AQ53FP2 167 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 ARHGAP15Q53QZ3 475 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 NDUFAF5Q5TEU4 345 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 CD276Q5ZPR3 534 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 SDE2Q6IQ49 451 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 CDC73Q6P1J9 531 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 SMARCD3Q6STE5 483 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 ZNF620Q6ZNG0 422 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 IDO2Q6ZQW0 420 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 UBE3DQ7Z6J8 389 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 CDH24Q86UP0 819 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 TPRA1Q86W33 373 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 TTLQ8NG68 377 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 OR4M2Q8NGB6 313 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 FAM46AQ96IP4 442 aaKnown RBP8.2□□□□□ -1.1
TDP1-204ENST00000545686 OR2M2Q96R28 347 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 BBS4Q96RK4 519 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 THAP7Q9BT49 309 aaPredicted RBP8.2□□□□□ -1.1
TDP1-204ENST00000545686 DPH7Q9BTV6 452 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 ACAT2Q9BWD1 397 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 OSGEPL1Q9H4B0 414 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 TMEM39AQ9NV64 488 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 CUEDC1Q9NWM3 386 aaPredicted RBP8.2□□□□□ -1.1
TDP1-204ENST00000545686 CNIH4Q9P003 139 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 COPZ2Q9P299 210 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 TNFRSF10DQ9UBN6 386 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 PLAGL1Q9UM63 463 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 CACNG2Q9Y698 323 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 NOTCH4Q99466 2003 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 A0A0A6YYJ9 748 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 MAN2B1O00754 1011 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 TPD52L2O43399 206 aaKnown RBP8.2□□□□□ -1.1
TDP1-204ENST00000545686 FGF19O95750 216 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 C8AP07357 584 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 ANXA3P12429 323 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 NPR2P20594 1047 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 PRKAR1BP31321 381 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 ACSL1P33121 698 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 PITPNBP48739 271 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 PRR5P85299 388 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 SP3Q02447 781 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 FZD5Q13467 585 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 ZNF311Q5JNZ3 666 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 CLEC12AQ5QGZ9 265 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 PYHIN1Q6K0P9 492 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 HDDC2Q7Z4H3 204 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 AMIGO1Q86WK6 493 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 TP53I13Q8NBR0 393 aaPredicted RBP8.2□□□□□ -1.1
TDP1-204ENST00000545686 OR2T33Q8NG76 320 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 SORCS1Q8WY21 1168 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 MYLIPQ8WY64 445 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 TFGQ92734 400 aaPredicted RBP8.2□□□□□ -1.1
TDP1-204ENST00000545686 HGDQ93099 445 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 OTUB2Q96DC9 234 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 ABCG5Q9H222 651 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 GHITMQ9H3K2 345 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 FN3KQ9H479 309 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 KRCC1Q9NPI7 259 aaPredicted RBP8.2□□□□□ -1.1
TDP1-204ENST00000545686 INPP5EQ9NRR6 644 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 SEMA4GQ9NTN9 838 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 KLHL28Q9NXS3 571 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 H2AFY2Q9P0M6 372 aaPredicted RBP8.2□□□□□ -1.1
TDP1-204ENST00000545686 EIF3KQ9UBQ5 218 aaKnown RBP8.2□□□□□ -1.1
TDP1-204ENST00000545686 NUP50Q9UKX7 468 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 ENTPD4Q9Y227 616 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.2□□□□□ -1.1
TDP1-204ENST00000545686 NUBP2Q9Y5Y2 271 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 STON1Q9Y6Q2 735 aa8.2□□□□□ -1.1
TDP1-204ENST00000545686 SNRNP200O75643 2136 aaKnown RBP8.19□□□□□ -1.1
TDP1-204ENST00000545686 C2orf92A0A1B0GVN3 265 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 ZSCAN5BA6NJL1 495 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 SMLR1H3BR10 107 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 KPNA3O00505 521 aaPredicted RBP8.19□□□□□ -1.1
TDP1-204ENST00000545686 FABP7O15540 132 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 LZTS3O60299 673 aaPredicted RBP8.19□□□□□ -1.1
TDP1-204ENST00000545686 SLC22A5O76082 557 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 OR5F1O95221 314 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 HMGN2P05204 90 aaKnown RBP8.19□□□□□ -1.1
TDP1-204ENST00000545686 TPOP07202 933 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 PEPDP12955 493 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 AHCYP23526 432 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 BTCP35070 178 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms